Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.56□□□□□ -2
RFT1Q96AA3 AC008521.1-201ENST00000587471 187 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.56□□□□□ -2
RFT1Q96AA3 AP000787.2-201ENST00000604432 568 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AC090115.4-201ENST00000609970 188 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 MIR7112-201ENST00000616126 65 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AC025034.2-201ENST00000623264 286 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AC124864.2-201ENST00000624736 186 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 U6.99-201ENST00000637524 83 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFT1Q96AA3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.56□□□□□ -2
RFT1Q96AA3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RFT1Q96AA3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.56□□□□□ -2
RFT1Q96AA3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
RFT1Q96AA3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RFT1Q96AA3 Y_RNA.88-201ENST00000363029 99 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 RNU4-12P-201ENST00000365233 139 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.55□□□□□ -2
RFT1Q96AA3 Y_RNA.409-201ENST00000383990 98 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 RNU6-166P-201ENST00000384371 107 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 MIR449B-201ENST00000384995 97 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
RFT1Q96AA3 U3.19-201ENST00000390893 196 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.55□□□□□ -2
RFT1Q96AA3 MTND5P1-201ENST00000445440 1375 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 ADAM3A-203ENST00000461344 2157 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RFT1Q96AA3 AC019235.1-201ENST00000503847 207 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.55□□□□□ -2
RFT1Q96AA3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 Y_RNA.704-201ENST00000516851 102 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 PSMA2P1-201ENST00000526365 646 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AP002404.1-201ENST00000532005 451 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.55□□□□□ -2
RFT1Q96AA3 AC004486.1-201ENST00000546846 233 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 MIR4782-201ENST00000577987 79 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AC103810.1-201ENST00000579873 453 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.55□□□□□ -2
RFT1Q96AA3 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.55□□□□□ -2
RFT1Q96AA3 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AC098848.2-201ENST00000588023 330 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AL391646.1-201ENST00000603860 190 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AC004520.1-201ENST00000608362 1413 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.55□□□□□ -2
RFT1Q96AA3 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 U4.5-201ENST00000617137 123 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AC073534.2-201ENST00000620377 381 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 MIR6863-201ENST00000636112 90 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 MIR3688-2-201ENST00000636963 87 ntBASIC2.55□□□□□ -2
RFT1Q96AA3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFT1Q96AA3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFT1Q96AA3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFT1Q96AA3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RFT1Q96AA3 RNU6-867P-201ENST00000364956 107 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.54□□□□□ -2
RFT1Q96AA3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
RFT1Q96AA3 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 MIR592-201ENST00000384959 97 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 MTCO3P40-201ENST00000392516 676 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 RNU4-47P-201ENST00000410876 114 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.54□□□□□ -2
RFT1Q96AA3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.54□□□□□ -2
RFT1Q96AA3 AL353193.1-201ENST00000421444 268 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.54□□□□□ -2
RFT1Q96AA3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.54□□□□□ -2
RFT1Q96AA3 HMGB1P31-201ENST00000437242 427 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 AC009296.1-201ENST00000443146 155 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 AL078601.1-201ENST00000444542 271 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 NFU1P2-201ENST00000448700 469 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.54□□□□□ -2
RFT1Q96AA3 AP000705.1-201ENST00000454567 350 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RFT1Q96AA3 FTH1P2-201ENST00000466086 412 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.54□□□□□ -2
RFT1Q96AA3 RN7SL504P-201ENST00000494496 287 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.54□□□□□ -2
RFT1Q96AA3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.54□□□□□ -2
RFT1Q96AA3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.54□□□□□ -2
RFT1Q96AA3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.54□□□□□ -2
RFT1Q96AA3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.54□□□□□ -2
RFT1Q96AA3 FAM92A1P1-201ENST00000528023 890 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.54□□□□□ -2
RFT1Q96AA3 AC005261.5-201ENST00000596280 355 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 AL049779.4-201ENST00000604500 156 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 AL359880.1-201ENST00000621879 266 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 AC024940.5-201ENST00000622889 474 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.54□□□□□ -2
RFT1Q96AA3 AL035425.3-201ENST00000564206 4996 ntBASIC2.54□□□□□ -2
RFT1Q96AA3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.53□□□□□ -2
RFT1Q96AA3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms