Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC110794.1-201ENST00000505816 425 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 AC113155.1-201ENST00000511141 769 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 IGKV2D-23-201ENST00000518179 286 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.33□□□□□ -1.72
BRF1Q92994 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRF1Q92994 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.33□□□□□ -1.72
BRF1Q92994 MIR5187-201ENST00000583479 76 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 KLKP1-201ENST00000595979 403 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 AP000787.2-201ENST00000604432 568 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.33□□□□□ -1.72
BRF1Q92994 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRF1Q92994 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
BRF1Q92994 AC091812.1-201ENST00000432235 1948 ntBASIC4.33□□□□□ -1.72
BRF1Q92994 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
BRF1Q92994 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.32□□□□□ -1.72
BRF1Q92994 AC008725.1-201ENST00000605123 2263 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
BRF1Q92994 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BRF1Q92994 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRF1Q92994 MIR412-201ENST00000362142 91 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 RNU6-283P-201ENST00000364788 107 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 Y_RNA.556-201ENST00000384677 113 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 U8.11-201ENST00000384699 133 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 U8.12-201ENST00000384701 133 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 Y_RNA.577-201ENST00000384794 101 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 RNU6-823P-201ENST00000391042 103 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 MIR1193-201ENST00000408109 78 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 RNU6-101P-201ENST00000410323 104 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 TOMM22P1-201ENST00000418578 312 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.32□□□□□ -1.72
BRF1Q92994 U8.18-201ENST00000459285 133 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 RN7SL132P-201ENST00000478131 296 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 AL160314.1-201ENST00000490836 438 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF1Q92994 AC026402.1-201ENST00000513642 170 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.32□□□□□ -1.72
BRF1Q92994 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.32□□□□□ -1.72
BRF1Q92994 SNORA31.8-201ENST00000516327 108 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 RNU6-635P-201ENST00000516651 102 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 AC022616.4-201ENST00000522985 181 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.32□□□□□ -1.72
BRF1Q92994 TRAV32-201ENST00000553993 340 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.32□□□□□ -1.72
BRF1Q92994 AC018889.1-201ENST00000605372 397 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 AP002826.1-201ENST00000608835 315 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 AP000553.6-201ENST00000641242 118 ntBASIC4.32□□□□□ -1.72
BRF1Q92994 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRF1Q92994 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRF1Q92994 CDC27P3-201ENST00000635418 1910 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 MAPK10-372ENST00000641954 3413 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 Y_RNA.380-201ENST00000365663 111 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 RNU6-1025P-201ENST00000410629 104 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 RNU6-325P-201ENST00000411132 105 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.31□□□□□ -1.72
BRF1Q92994 DPH3P2-201ENST00000422618 250 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF1Q92994 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.31□□□□□ -1.72
BRF1Q92994 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.31□□□□□ -1.72
BRF1Q92994 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.31□□□□□ -1.72
BRF1Q92994 snoU13.4-201ENST00000458916 104 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 FTH1P2-201ENST00000466086 412 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 AC146944.2-203ENST00000502493 354 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 AC022447.4-201ENST00000504053 364 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 AC139495.1-202ENST00000513164 354 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 ACA59.1-201ENST00000515966 143 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 AL355297.3-201ENST00000604082 446 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 AC124312.5-201ENST00000604451 268 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 AC123912.5-201ENST00000605470 343 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.31□□□□□ -1.72
BRF1Q92994 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.31□□□□□ -1.72
BRF1Q92994 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 AC007656.2-201ENST00000624902 4547 ntBASIC4.31□□□□□ -1.72
BRF1Q92994 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
BRF1Q92994 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.31□□□□□ -1.72
BRF1Q92994 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRF1Q92994 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRF1Q92994 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRF1Q92994 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
BRF1Q92994 SNORA7.2-201ENST00000364446 145 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 RNU6-384P-201ENST00000364900 104 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 RNU6-790P-201ENST00000384479 105 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 RNU6-1109P-201ENST00000391187 107 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 AL138885.1-201ENST00000405921 675 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF1Q92994 CBX3P6-201ENST00000430257 527 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF1Q92994 RNU6-1037P-201ENST00000459571 107 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF1Q92994 RPL21P13-201ENST00000488305 481 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF1Q92994 AC009812.2-201ENST00000517657 457 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 TOMM20P2-201ENST00000540082 421 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF1Q92994 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF1Q92994 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.3□□□□□ -1.72
BRF1Q92994 AC025946.2-201ENST00000603398 234 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 AC016727.2-201ENST00000603988 621 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF1Q92994 AL021879.1-201ENST00000611756 288 ntBASIC4.3□□□□□ -1.72
BRF1Q92994 AL138825.1-201ENST00000618587 192 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms