Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 BTF3P15-201ENST00000455606 336 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC022493.1-201ENST00000492984 337 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC023194.1-201ENST00000493084 308 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 SNORA31.11-201ENST00000516528 139 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 BTF3P12-201ENST00000519620 469 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 RANP3-201ENST00000530970 276 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 LARP7P3-201ENST00000579888 337 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 RSL24D1P11-201ENST00000591045 491 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AL022154.1-201ENST00000604698 785 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 MIR6134-201ENST00000617606 109 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AL449363.1-201ENST00000617815 186 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AL137790.1-201ENST00000634283 177 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC090582.1-201ENST00000636321 199 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 U6.114-201ENST00000636407 96 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.56□□□□□ -2
CKAP2Q8WWK9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.56□□□□□ -2
CKAP2Q8WWK9 AC010329.5-201ENST00000623497 2174 ntBASIC2.56□□□□□ -2
CKAP2Q8WWK9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CKAP2Q8WWK9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CKAP2Q8WWK9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
CKAP2Q8WWK9 RNU6-181P-201ENST00000363225 107 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 SNORA62.1-201ENST00000364287 154 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 RNU1-112P-201ENST00000364401 164 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 SNORD116-9-201ENST00000384000 95 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 SNORA75-201ENST00000384158 137 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 RNU6-74P-201ENST00000384235 107 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 SNORD116-3-201ENST00000384287 95 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 SNORD116-1-201ENST00000384335 95 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 SNORD116-7-201ENST00000384404 95 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 SNORD116-5-201ENST00000384462 95 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 MIR634-201ENST00000385208 97 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 MIR147B-201ENST00000390185 80 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AL390237.1-201ENST00000404226 1415 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 RNU6-1328P-201ENST00000410938 106 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC133104.1-201ENST00000429100 218 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 MTND4P32-201ENST00000437189 1237 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 AL360221.1-201ENST00000445989 335 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC003071.1-201ENST00000451219 789 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CKAP2Q8WWK9 RPS29P26-201ENST00000477483 171 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 EIF4EP3-201ENST00000498782 656 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC104806.1-201ENST00000508720 308 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC112206.3-201ENST00000514578 389 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 RNU6-445P-201ENST00000516949 107 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC093536.2-201ENST00000565257 1406 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 MIR548AC-201ENST00000585049 88 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AL356280.1-201ENST00000603614 379 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.55□□□□□ -2
CKAP2Q8WWK9 AC109347.2-201ENST00000610220 349 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 AL359740.1-201ENST00000624340 592 ntBASIC2.55□□□□□ -2
CKAP2Q8WWK9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CKAP2Q8WWK9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CKAP2Q8WWK9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.54□□□□□ -2
CKAP2Q8WWK9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.54□□□□□ -2
CKAP2Q8WWK9 SNORD3E-201ENST00000362899 217 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 RNU6-1097P-201ENST00000363586 107 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 RNU6-108P-201ENST00000365558 107 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 RNU6-116P-201ENST00000384042 109 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 AL162578.1-201ENST00000406202 378 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 RNA5SP21-201ENST00000410917 96 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 MTND2P22-201ENST00000444325 1033 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 C1DP4-201ENST00000455429 424 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 AC116655.1-201ENST00000508324 901 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 AC117522.2-201ENST00000510049 657 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 RNU6-430P-201ENST00000517078 107 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 EIF4BP1-201ENST00000554881 351 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.54□□□□□ -2
CKAP2Q8WWK9 AC025678.1-201ENST00000567861 338 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.54□□□□□ -2
CKAP2Q8WWK9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.54□□□□□ -2
CKAP2Q8WWK9 RN7SKP299-201ENST00000606679 301 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.54□□□□□ -2
CKAP2Q8WWK9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.54□□□□□ -2
CKAP2Q8WWK9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms