Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SETP6-201ENST00000479329 568 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AC116655.1-201ENST00000508324 901 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AC118282.2-201ENST00000508739 374 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 MTCYBP43-201ENST00000513621 740 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 ACA64.5-201ENST00000516207 127 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AC093249.1-201ENST00000567049 203 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AC015688.6-201ENST00000577737 104 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 MIR3169-201ENST00000578032 83 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AP003465.2-201ENST00000602571 373 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AL161798.1-201ENST00000604630 131 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AC034229.4-201ENST00000607861 441 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AL136313.1-201ENST00000624804 202 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 RNU4-13P-201ENST00000364019 141 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 SNORA25-201ENST00000384384 134 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AL606490.4-201ENST00000423117 127 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 ISCA1P1-201ENST00000426679 387 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AL669831.1-202ENST00000428504 417 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 RPL7P36-201ENST00000444633 681 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 MTND2P4-201ENST00000445034 1004 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 RPL23AP35-201ENST00000451906 501 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC004223.1-201ENST00000479840 271 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC145146.1-201ENST00000496370 254 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 YWHAEP4-201ENST00000505390 198 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC027309.2-201ENST00000520566 192 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC018630.3-201ENST00000542637 96 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 MTCO2P2-201ENST00000591258 225 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC011494.1-201ENST00000596454 237 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AL391646.1-201ENST00000603860 190 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AL139344.1-201ENST00000605228 195 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC107952.2-201ENST00000606048 486 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC006213.5-201ENST00000619673 288 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC013470.4-201ENST00000619978 986 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 AC009033.1-201ENST00000624279 431 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 MIR6866-201ENST00000638146 69 ntBASIC0.49□□□□□ -2.33
SPTSSBQ8NFR3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 FARSBP1-201ENST00000435808 1778 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 U8.2-201ENST00000363156 134 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 RNU6-1167P-201ENST00000363227 94 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 RNA5SP190-201ENST00000365222 118 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 RNU6-1274P-201ENST00000384557 107 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 MIR491-201ENST00000384877 84 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 MIR515-2-201ENST00000384883 83 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 MIR515-1-201ENST00000384884 83 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AL133264.1-201ENST00000407157 562 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 RNU2-64P-201ENST00000411315 191 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 RPL21P90-201ENST00000415692 466 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 MTCO3P1-205ENST00000422088 832 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 C8orf59P1-201ENST00000429930 303 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 OR6C5P-201ENST00000452388 923 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 PSMC1P5-201ENST00000512850 177 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 RNU6-1183P-201ENST00000517054 60 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC019176.1-201ENST00000518519 225 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC087276.1-201ENST00000529659 480 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AL512310.1-201ENST00000548639 172 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC090615.1-201ENST00000577519 154 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 MIR3937-201ENST00000580135 106 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC091057.3-201ENST00000602684 733 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AL033523.1-201ENST00000605153 153 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AL022345.2-201ENST00000606307 135 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 BX284668.6-201ENST00000606899 438 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 BX323046.1-201ENST00000610145 535 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AL021879.1-201ENST00000611756 288 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC090970.3-201ENST00000612566 866 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 MIR8065-201ENST00000620577 100 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC022513.1-201ENST00000624512 117 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 AC008993.2-201ENST00000631744 806 ntBASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SPTSSBQ8NFR3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SPTSSBQ8NFR3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.47□□□□□ -2.33
SPTSSBQ8NFR3 AC138393.1-203ENST00000327086 343 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms