Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC091286.1-201ENST00000431233 461 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 AL513124.1-201ENST00000450410 614 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 AC034236.1-201ENST00000469891 373 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 S100A11P1-201ENST00000477525 312 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 RPS29P19-201ENST00000479709 171 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 AL359273.1-201ENST00000510918 627 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 AC091144.1-201ENST00000519573 138 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 IFITM8P-201ENST00000522529 394 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 MIR432-201ENST00000606207 94 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 AL450472.1-202ENST00000637286 180 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 AC011266.1-201ENST00000624119 3569 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 AC139713.2-214ENST00000642059 1811 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 RNU1-14P-201ENST00000362759 152 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 SNORD81.1-201ENST00000363064 77 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.439-201ENST00000384119 94 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 RNY3P4-201ENST00000384428 101 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 RPS29P13-201ENST00000402041 169 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 MIR1179-201ENST00000408703 91 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 ELOCP19-201ENST00000411919 318 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 AC007919.1-201ENST00000429380 217 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 AC092798.1-201ENST00000458542 409 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 snoU13.24-201ENST00000458998 104 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 U8.22-201ENST00000459141 133 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 SNORD108-201ENST00000459332 71 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 RPS23P5-201ENST00000495419 428 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 AL592156.1-201ENST00000508758 304 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 PARP4P3-201ENST00000510265 317 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 RNU6-1338P-201ENST00000516328 91 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 RNU6-572P-201ENST00000516724 80 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 TRAV8-5-201ENST00000537369 341 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 AC093023.1-201ENST00000547375 507 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 AL137100.2-201ENST00000555786 315 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 MIR1254-2-201ENST00000579553 63 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 SNRPGP15-201ENST00000600149 222 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 MIR7702-201ENST00000621931 59 ntBASIC3.96□□□□□ -1.78
NUP43Q8NFH3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NUP43Q8NFH3 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 AL136964.1-201ENST00000622038 2990 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 LINC02555-201ENST00000563933 1951 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.16-201ENST00000362421 102 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.29-201ENST00000362570 113 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 RNU6-336P-201ENST00000364891 107 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 MIR34A-201ENST00000385130 110 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 AC007560.1-201ENST00000426912 237 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 AC010265.1-201ENST00000513509 211 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 RN7SKP122-201ENST00000515923 296 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 RNU6-377P-201ENST00000515965 102 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 RNA5SP49-201ENST00000516450 115 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 RNA5SP519-201ENST00000516480 119 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 RPL23AP78-201ENST00000599928 470 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 U2.22-201ENST00000636441 106 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 U4.7-201ENST00000638126 106 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 NOL8P1-201ENST00000508336 3529 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 AP001148.1-201ENST00000624124 2359 ntBASIC3.95□□□□□ -1.78
NUP43Q8NFH3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP43Q8NFH3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 Z82217.1-201ENST00000625157 8149 ntBASIC3.94□□□□□ -1.78
NUP43Q8NFH3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
NUP43Q8NFH3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms