Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC126177.3-201ENST00000551839 688 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 OR4H12P-201ENST00000556269 907 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC005951.2-201ENST00000576282 495 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 MIR4325-201ENST00000583049 90 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC073539.2-201ENST00000597113 165 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AL158032.1-201ENST00000605401 106 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AL732372.2-225ENST00000642124 456 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 NCAPGP1-201ENST00000505112 1814 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AL353743.1-202ENST00000431724 1695 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 RNA5SP374-201ENST00000362939 125 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.510-201ENST00000384511 114 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-882P-201ENST00000391025 103 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AC243428.1-201ENST00000421099 264 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 HMGB1P12-201ENST00000438594 598 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AL731563.1-201ENST00000442202 214 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AL359672.1-201ENST00000442302 409 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 RPL12P25-201ENST00000455592 494 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 S100A11P2-201ENST00000467589 312 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 UBE2DNL-203ENST00000474922 222 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AC026801.1-201ENST00000497178 464 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AC104136.1-201ENST00000512969 394 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 SNORA25.10-201ENST00000515926 124 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-390P-201ENST00000516259 103 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-323P-201ENST00000521915 107 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 EIF4BP1-201ENST00000554881 351 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 7SK.7-201ENST00000603504 247 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AC010680.4-201ENST00000605334 543 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AC011890.2-201ENST00000613393 294 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 SDR42E1P2-201ENST00000614861 481 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 ATP5A1P2-202ENST00000616464 443 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 AP003355.3-201ENST00000623465 114 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 MIR4275-201ENST00000636486 87 ntBASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC44A3Q8N4M1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.80-201ENST00000362996 102 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-371P-201ENST00000364283 108 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-1303P-201ENST00000364841 107 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.364-201ENST00000365532 101 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.401-201ENST00000383965 117 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-505P-201ENST00000384427 107 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-45P-201ENST00000384471 107 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 MIR153-1-201ENST00000384914 90 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 RPS4XP7-201ENST00000406274 780 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 MIR1289-1-201ENST00000408836 144 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC114482.1-201ENST00000418010 247 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 CKS1BP5-201ENST00000434172 273 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 GSTA11P-201ENST00000452866 669 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 BTF3P15-201ENST00000455606 336 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 HMGB1P30-201ENST00000492455 606 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 BTF3L4P4-201ENST00000506381 449 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 ERHP1-201ENST00000523006 310 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC008489.1-201ENST00000524271 483 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC011494.1-201ENST00000596454 237 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC012119.1-201ENST00000603184 222 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC005014.2-201ENST00000607795 599 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC44A3Q8N4M1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms