Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 MTCO3P23-201ENST00000561363 289 ntBASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 FRG2DP-202ENST00000566967 323 ntBASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 AL670379.10-201ENST00000604330 253 ntBASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 AC245389.1-201ENST00000605141 529 ntBASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 AL670379.9-201ENST00000605428 253 ntBASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 AC073476.4-201ENST00000628409 72 ntBASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLIP4Q8N3C7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CLIP4Q8N3C7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RNU6-371P-201ENST00000364283 108 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RNU6-512P-201ENST00000364438 103 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 Y_RNA.259-201ENST00000364619 101 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 SNORA4.3-201ENST00000365564 137 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RNU6-45P-201ENST00000384471 107 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIR490-201ENST00000384865 128 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIR493-201ENST00000385254 89 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIR1302-11-201ENST00000408051 138 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIR1302-9-201ENST00000408365 138 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIR548K-201ENST00000408406 116 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIR1302-10-201ENST00000408734 138 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC074085.1-201ENST00000413598 418 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RPL21P90-201ENST00000415692 466 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RPL7P10-201ENST00000417407 739 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RPL27AP8-201ENST00000424277 446 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC005534.2-201ENST00000431047 433 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 HMGN2P31-201ENST00000432430 273 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AL118496.2-201ENST00000448300 230 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC107399.1-201ENST00000451226 265 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 SNORD19B-201ENST00000459623 84 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RPL37P6-201ENST00000460682 294 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RPS15AP34-201ENST00000487776 387 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RPL21P13-201ENST00000488305 481 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 APOOP4-201ENST00000513530 597 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 SNORA14.1-201ENST00000516113 141 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RNA5SP471-201ENST00000516971 106 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 SNORA25.17-201ENST00000517184 124 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 RNA5SP454-201ENST00000517231 127 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC034105.4-201ENST00000568304 277 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIR4790-201ENST00000577799 79 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC012119.1-201ENST00000603184 222 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 APOOP1-201ENST00000604695 592 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIR1302-2-201ENST00000607096 138 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AP002826.1-201ENST00000608835 315 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC090132.2-201ENST00000615881 347 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 AC022418.1-201ENST00000624118 445 ntBASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLIP4Q8N3C7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 U3.6-201ENST00000363622 211 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 SNORD116-11-201ENST00000383882 92 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RNU6-1227P-201ENST00000383981 107 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 Y_RNA.534-201ENST00000384599 112 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RNA5SP229-201ENST00000410809 99 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RNU4-14P-201ENST00000410858 122 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL354751.2-201ENST00000415471 210 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RPLP0P7-201ENST00000416050 667 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 MTCO2P12-201ENST00000427426 682 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL592045.1-201ENST00000429867 352 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RPS3AP52-201ENST00000435639 297 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AC115115.1-201ENST00000449927 248 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 Y_RNA.635-201ENST00000459041 101 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AC012181.1-201ENST00000479895 423 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RPL39P5-202ENST00000512505 151 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RN7SKP24-201ENST00000515888 284 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 SCARNA15.2-201ENST00000516409 127 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RNU6-1069P-201ENST00000516612 133 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RNU6-143P-201ENST00000516942 93 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms