Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 Y_RNA.172-201ENST00000363765 102 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 RN7SKP113-201ENST00000363891 295 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 MIR223-201ENST00000385204 110 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AC007969.2-201ENST00000441891 191 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AP000705.1-201ENST00000454567 350 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 RN7SL172P-201ENST00000460535 303 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 RPL30P12-201ENST00000474666 353 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AC021269.2-201ENST00000532318 330 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AC019159.1-201ENST00000605094 187 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AC011603.4-201ENST00000611325 277 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 MIR6730-201ENST00000622213 67 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 Y_RNA.329-201ENST00000365209 107 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 RNU6-1310P-201ENST00000384153 107 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 Y_RNA.563-201ENST00000384707 108 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 MIR544A-201ENST00000384855 91 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 RNY4P18-201ENST00000391107 89 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 U3.32-201ENST00000408116 212 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 ELOCP21-201ENST00000412558 336 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AC009963.1-201ENST00000417265 157 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AL139148.1-201ENST00000427122 680 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 FTH1P6-201ENST00000430768 320 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AL389915.2-201ENST00000454576 441 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 RN7SKP122-201ENST00000515923 296 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AC024614.2-201ENST00000577584 372 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AP005432.2-201ENST00000608162 586 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC116Q8IYX3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 AC099654.7-201ENST00000635788 2127 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 RNU6-1285P-201ENST00000363480 105 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 snoU2_19.4-201ENST00000364329 80 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 RNU6-1141P-201ENST00000364520 107 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 Y_RNA.337-201ENST00000365312 102 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 RNU6-429P-201ENST00000384582 108 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 AL512633.1-201ENST00000399931 655 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 RN7SKP16-201ENST00000410180 299 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 EEF1B2P7-201ENST00000451177 676 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 AC016925.1-201ENST00000458303 298 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 AC010285.1-201ENST00000470580 392 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 CYCSP26-201ENST00000534107 320 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 AC090877.1-201ENST00000561418 344 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 AL670379.2-201ENST00000604983 252 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 Y_RNA.802-201ENST00000614892 130 ntBASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC116Q8IYX3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms