Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 VN1R108P-201ENST00000431580 830 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 MTCO3P5-201ENST00000433620 714 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AL714022.1-201ENST00000439897 151 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 RPL32P28-201ENST00000443577 397 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AP000705.1-201ENST00000454567 350 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC139453.3-201ENST00000493276 369 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC008549.1-201ENST00000512900 643 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 RNU6-123P-201ENST00000516163 102 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 RNU6-914P-201ENST00000516749 109 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC009063.1-201ENST00000563342 702 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 SNORD53-201ENST00000579969 78 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC024619.4-201ENST00000580924 316 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 MIR3945-201ENST00000581853 98 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 MIR3670-1-201ENST00000584160 65 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 MIR3670-3-201ENST00000584855 65 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 Z99129.1-201ENST00000612510 255 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC012409.4-201ENST00000612923 249 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 UCA1.1-201ENST00000620952 75 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC093648.1-201ENST00000623546 606 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC006020.1-201ENST00000420179 1854 ntBASIC2.71□□□□□ -1.98
CCDC60Q8IWA6 AC010680.1-201ENST00000590024 3590 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC007336.1-201ENST00000576365 3828 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 SNORA62.1-201ENST00000364287 154 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 RNU6-108P-201ENST00000365558 107 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 Y_RNA.582-201ENST00000391023 95 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AL162578.1-201ENST00000406202 378 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 RNU2-66P-201ENST00000410650 161 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 RNU2-16P-201ENST00000410712 136 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AL109913.1-201ENST00000421173 514 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC009414.1-201ENST00000427200 443 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AL589823.1-201ENST00000429577 183 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 MTCO2P11-201ENST00000431069 680 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AL451074.3-201ENST00000437709 472 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC023194.1-201ENST00000493084 308 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 SUMO2P6-201ENST00000505273 288 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 OR5AL2P-201ENST00000532185 920 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 HSPE1P20-201ENST00000538133 289 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 ADI1P3-201ENST00000549509 470 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AGGF1P4-201ENST00000568249 801 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC004223.2-201ENST00000590309 544 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC174048.1-201ENST00000603389 144 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 MIR15A-201ENST00000607334 83 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC046143.2-201ENST00000609789 160 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC011939.3-201ENST00000613686 466 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 AC008669.1-201ENST00000565823 2178 ntBASIC2.7□□□□□ -1.98
CCDC60Q8IWA6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 ELF2P3-201ENST00000445099 1506 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 ZNF519P1-201ENST00000449011 1626 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 RNU6-1097P-201ENST00000363586 107 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 SNORD114-30-201ENST00000364448 72 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 RNU6-61P-201ENST00000365528 109 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 RNU6-74P-201ENST00000384235 107 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 CISD1P1-201ENST00000393907 327 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 MIR888-201ENST00000401186 77 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 RNU2-9P-201ENST00000410194 145 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 RPL19P1-201ENST00000411635 428 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 RPS15AP9-201ENST00000439856 381 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 RNU7-23P-201ENST00000459465 62 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 MRPS17P3-201ENST00000465453 385 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 RPS15AP34-201ENST00000487776 387 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 RBBP4P6-201ENST00000508098 202 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC010493.1-201ENST00000513479 292 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms