Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AL162373.1-201ENST00000620433 407 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC025034.2-201ENST00000623264 286 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-486P-201ENST00000363116 107 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-960P-201ENST00000364056 120 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-1280P-201ENST00000365211 107 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 SNORA46.1-201ENST00000391069 153 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 CIR1P3-201ENST00000405137 479 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 U6atac.2-201ENST00000408644 118 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-1025P-201ENST00000410629 104 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 XKRYP1-201ENST00000423438 492 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 XKRYP2-201ENST00000432915 492 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 USP9YP8-201ENST00000441913 500 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 MTND5P2-201ENST00000442927 1142 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC011005.2-201ENST00000487324 359 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 RPS3AP22-201ENST00000488297 769 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC023194.1-201ENST00000493084 308 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 FAM92A1P2-202ENST00000504766 877 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 RNA5SP112-201ENST00000515937 99 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 RNA5SP337-201ENST00000517007 109 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AP003181.2-201ENST00000528941 181 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 LINC00933-203ENST00000559812 219 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC012435.1-202ENST00000568772 240 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AC022022.2-201ENST00000602989 360 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 AP001486.3-201ENST00000615334 372 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 TEX21P-201ENST00000447107 1476 ntBASIC2.05□□□□□ -2.08
NUDCD3Q8IVD9 U3.12-201ENST00000364498 214 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 RNU1-148P-201ENST00000384472 162 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-748P-201ENST00000384648 107 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 MIR17-201ENST00000385012 84 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 MIR518D-201ENST00000385014 87 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 SNORA40C-201ENST00000391285 128 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AL445529.1-201ENST00000398713 389 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 Y_RNA.608-201ENST00000410647 95 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 EIF4EP4-201ENST00000424916 578 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AL078601.1-201ENST00000444542 271 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 ZNF114P1-201ENST00000453500 292 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC007182.2-201ENST00000489251 402 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 SMURF2P1-201ENST00000514992 481 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 Y_RNA.689-201ENST00000516589 107 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AP003122.4-201ENST00000530980 758 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 CBX3P7-201ENST00000532876 502 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AL157871.3-201ENST00000557231 293 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC008749.1-201ENST00000597650 306 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AL031775.1-201ENST00000607014 887 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 MIR15A-201ENST00000607334 83 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC034229.4-201ENST00000607861 441 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC027807.2-201ENST00000616099 408 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 AC024581.2-201ENST00000619986 252 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 DUXAP9-208ENST00000622815 614 ntBASIC2.04□□□□□ -2.08
NUDCD3Q8IVD9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 RNU4-1-201ENST00000363925 141 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-166P-201ENST00000384371 107 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 AL133475.1-201ENST00000404414 305 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 AC003685.2-201ENST00000422795 395 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 RPS3AP44-201ENST00000425466 790 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 RPS15AP9-201ENST00000439856 381 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 EPS15P1-201ENST00000448836 336 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 BTF3P15-201ENST00000455606 336 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 AC055731.1-201ENST00000474387 401 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 MIR892C-201ENST00000516410 77 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 RNU7-51P-201ENST00000516560 62 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 OR5B19P-201ENST00000531766 928 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 AC012213.3-201ENST00000577199 777 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 AC174048.1-201ENST00000603389 144 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms