Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNU6-1179P-201ENST00000384667 107 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 CALM2P3-201ENST00000400429 449 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 Y_RNA.623-201ENST00000411128 95 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 Z92545.1-201ENST00000411782 234 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AC096664.2-201ENST00000411843 406 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB1Q86U70 AL358075.3-201ENST00000426289 226 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AL139132.1-201ENST00000431587 344 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AC000111.3-201ENST00000433478 193 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AL360271.2-201ENST00000447710 161 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 NDUFB1P2-201ENST00000449477 176 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.81□□□□□ -1.96
LDB1Q86U70 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB1Q86U70 AL583843.1-201ENST00000456070 346 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AL163973.1-201ENST00000484753 577 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AC113155.1-201ENST00000511141 769 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AC104136.1-201ENST00000512969 394 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB1Q86U70 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB1Q86U70 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.81□□□□□ -1.96
LDB1Q86U70 RPL23AP78-201ENST00000599928 470 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AL160281.1-201ENST00000605307 311 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AC012557.2-201ENST00000605919 418 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AC005046.1-201ENST00000608515 625 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 MIR6134-201ENST00000617606 109 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.81□□□□□ -1.96
LDB1Q86U70 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 ZNF519P1-201ENST00000449011 1626 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 AC006020.1-201ENST00000420179 1854 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LDB1Q86U70 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
LDB1Q86U70 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.8□□□□□ -1.96
LDB1Q86U70 MTND4P14-201ENST00000435799 1354 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 RNU6-552P-201ENST00000362869 119 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 RNU6-525P-201ENST00000363685 104 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 Y_RNA.255-201ENST00000364581 97 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 Y_RNA.381-201ENST00000365666 102 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 SNORA44-201ENST00000384584 132 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 RNU6-903P-201ENST00000391270 109 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 SNORA26.7-201ENST00000391288 122 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 UBE2V1P10-201ENST00000414685 269 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 ATG3P1-201ENST00000419507 911 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 AL627311.1-201ENST00000431514 115 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 RPL7P54-201ENST00000438336 674 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 RPL23AP58-201ENST00000440453 469 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 FDX1P2-201ENST00000450769 375 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LDB1Q86U70 BTF3P15-201ENST00000455606 336 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 SNRPFP3-201ENST00000457792 225 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 S100A11P2-201ENST00000467589 312 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB1Q86U70 HMGB1P30-201ENST00000492455 606 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB1Q86U70 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB1Q86U70 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB1Q86U70 AC009646.1-201ENST00000510455 318 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB1Q86U70 SNORA40.12-201ENST00000516329 111 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 SNORD19.2-201ENST00000516978 73 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 RNU6-56P-201ENST00000516986 93 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.8□□□□□ -1.96
LDB1Q86U70 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.8□□□□□ -1.96
LDB1Q86U70 AC006199.1-201ENST00000548728 219 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.8□□□□□ -1.96
LDB1Q86U70 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB1Q86U70 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.8□□□□□ -1.96
LDB1Q86U70 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.8□□□□□ -1.96
LDB1Q86U70 AC234778.2-201ENST00000566241 354 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 AC007151.1-201ENST00000572774 483 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB1Q86U70 AP001596.2-201ENST00000608410 312 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LDB1Q86U70 AC010889.1-201ENST00000566193 2666 ntBASIC2.8□□□□□ -1.96
LDB1Q86U70 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LDB1Q86U70 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.79□□□□□ -1.96
LDB1Q86U70 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LDB1Q86U70 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LDB1Q86U70 SNORD3E-201ENST00000362899 217 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LDB1Q86U70 UBA52P6-201ENST00000399822 382 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB1Q86U70 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB1Q86U70 MTCYBP8-201ENST00000422855 651 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AC016691.1-201ENST00000441321 413 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AC073415.1-201ENST00000449240 153 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 RNU6-261P-201ENST00000459506 102 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.79□□□□□ -1.96
LDB1Q86U70 AC083798.1-201ENST00000472671 131 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 RPL31P41-201ENST00000477967 372 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 RPL9P33-201ENST00000484311 566 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AC083906.5-201ENST00000503722 328 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AC019235.1-201ENST00000503847 207 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB1Q86U70 FAM92A1P2-202ENST00000504766 877 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.79□□□□□ -1.96
LDB1Q86U70 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.79□□□□□ -1.96
LDB1Q86U70 LRRC34P2-201ENST00000514850 553 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 RNU6-314P-201ENST00000516574 104 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms