Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 SNORD113-5-201ENST00000607261 78 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 AL353743.1-202ENST00000431724 1695 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 NOL8P1-201ENST00000508336 3529 ntBASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3DQ7Z6J8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AC139713.2-215ENST00000641428 5037 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 Y_RNA.44-201ENST00000362676 108 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 RNU6-137P-201ENST00000363680 108 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 RNU6-937P-201ENST00000384325 106 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 MIR153-2-201ENST00000385225 87 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 RNA5SP146-201ENST00000410743 123 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 RNA5SP31-201ENST00000411144 127 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AL732292.1-201ENST00000426692 226 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 MTCO1P5-201ENST00000433573 344 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 MTATP6P7-201ENST00000453315 681 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 RPL23AP75-201ENST00000491601 451 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 RNU6-1114P-201ENST00000516022 107 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 SCARNA24.2-201ENST00000516968 130 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AP002392.1-201ENST00000537692 208 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AC120057.2-201ENST00000571520 271 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 RN7SL722P-201ENST00000617780 284 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 RN7SL565P-201ENST00000618246 284 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AL136964.1-201ENST00000622038 2990 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 AC022336.2-201ENST00000568966 2538 ntBASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UBE3DQ7Z6J8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 MIR331-201ENST00000362302 94 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 SNORA7.2-201ENST00000364446 145 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 RNU5A-5P-201ENST00000411054 116 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 RNU6-1245P-201ENST00000411130 106 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC092047.1-201ENST00000424997 240 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 EIF1P2-201ENST00000428233 350 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 RPS15AP7-201ENST00000439294 405 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC016700.2-201ENST00000446011 156 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AL353705.4-201ENST00000449661 238 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 HSPE1P25-201ENST00000455484 251 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 snoU13.1-201ENST00000459157 104 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 RN7SL738P-201ENST00000470264 297 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 RN7SL41P-201ENST00000476144 297 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 RN7SL459P-201ENST00000481078 302 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 MRPL42P6-201ENST00000486397 371 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 RPL23AP49-201ENST00000492925 468 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 SNORA43.2-201ENST00000516652 128 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC100770.1-201ENST00000532310 322 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 MRPS36P4-201ENST00000534436 298 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AK6P2-201ENST00000549020 471 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 ZNF192P1-203ENST00000565888 810 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC023824.2-201ENST00000566185 400 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 MIR4330-201ENST00000579077 105 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC010928.2-201ENST00000588017 287 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 U6.99-201ENST00000637524 83 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC139713.2-214ENST00000642059 1811 ntBASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBE3DQ7Z6J8 AC092435.4-201ENST00000623012 4159 ntBASIC4.15□□□□□ -1.74
UBE3DQ7Z6J8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.15□□□□□ -1.74
UBE3DQ7Z6J8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms