Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPL39P28-201ENST00000465655 155 ntBASIC0.43□□□□□ -2.34
CSMD3Q7Z407 RNU4-77P-201ENST00000516692 156 ntBASIC0.43□□□□□ -2.34
CSMD3Q7Z407 AC069294.1-201ENST00000608397 350 ntBASIC0.43□□□□□ -2.34
CSMD3Q7Z407 AP003476.1-201ENST00000623984 516 ntBASIC0.43□□□□□ -2.34
CSMD3Q7Z407 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.43□□□□□ -2.34
CSMD3Q7Z407 SNORD51-201ENST00000384320 80 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 MIR325-201ENST00000385260 98 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 YWHAZP8-201ENST00000436935 731 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AC007151.1-201ENST00000572774 483 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 MIR4299-201ENST00000577899 72 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AC135803.1-201ENST00000608748 565 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AC002550.2-201ENST00000621246 394 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 MTND2P41-201ENST00000637599 773 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 Y_RNA.142-201ENST00000363491 102 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 MTND5P15-201ENST00000434246 349 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 HMGN2P9-201ENST00000476875 229 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AC004817.2-201ENST00000561794 651 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 MIR4713-201ENST00000582691 75 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 RNU5E-1-201ENST00000362477 120 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AL139098.1-201ENST00000407291 389 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 Y_RNA.610-201ENST00000410681 103 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AL133384.1-201ENST00000412744 351 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AC007742.1-201ENST00000425789 329 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 ELOCP26-201ENST00000436067 329 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 MTCYBP22-201ENST00000603788 447 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.42□□□□□ -2.34
CSMD3Q7Z407 AL590396.2-201ENST00000636511 1041 ntBASIC0.42□□□□□ -2.34
CSMD3Q7Z407 RNU6-939P-201ENST00000384634 107 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC005741.1-201ENST00000511094 432 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AL355802.3-201ENST00000607571 545 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC073968.1-201ENST00000618594 637 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 MIR6866-201ENST00000638146 69 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 ZNF680P1-201ENST00000436625 1469 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 OR4G2P-201ENST00000328113 903 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 MIR649-201ENST00000384843 97 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC092648.1-201ENST00000425870 423 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 MTCYBP3-201ENST00000445588 1137 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 RPL39P29-201ENST00000447779 157 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 RPL9P9-202ENST00000466501 579 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC022616.2-201ENST00000523185 300 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC007349.4-201ENST00000608114 532 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 Y_RNA.67-201ENST00000362870 100 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 RNA5SP266-201ENST00000410273 108 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 OR9R1P-201ENST00000412200 877 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AL158823.1-201ENST00000418441 478 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 BOLA3P3-201ENST00000505182 232 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC098591.2-201ENST00000510152 315 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC093510.2-201ENST00000562820 896 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.41□□□□□ -2.34
CSMD3Q7Z407 RPL21P136-201ENST00000605378 396 ntBASIC0.41□□□□□ -2.34
CSMD3Q7Z407 Y_RNA.170-201ENST00000363746 110 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.34
CSMD3Q7Z407 MIR30A-201ENST00000385092 71 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.4□□□□□ -2.34
CSMD3Q7Z407 MTND4LP10-201ENST00000435146 291 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 AC092393.1-201ENST00000439625 742 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.4□□□□□ -2.34
CSMD3Q7Z407 SNORA31.6-201ENST00000516241 130 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.4□□□□□ -2.34
CSMD3Q7Z407 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.4□□□□□ -2.34
CSMD3Q7Z407 AC002545.1-201ENST00000592511 181 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 AL022067.1-201ENST00000602426 454 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 AL589743.7-201ENST00000612637 233 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 MIR6718-201ENST00000616153 80 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 AC006213.5-201ENST00000619673 288 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 AC099654.5-201ENST00000636479 350 ntBASIC0.4□□□□□ -2.34
CSMD3Q7Z407 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.34
CSMD3Q7Z407 RNU6-1164P-201ENST00000364428 107 ntBASIC0.4□□□□□ -2.35
CSMD3Q7Z407 AL714022.1-201ENST00000439897 151 ntBASIC0.4□□□□□ -2.35
CSMD3Q7Z407 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.4□□□□□ -2.35
CSMD3Q7Z407 KATNBL1P6-201ENST00000453433 915 ntBASIC0.4□□□□□ -2.35
CSMD3Q7Z407 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.4□□□□□ -2.35
CSMD3Q7Z407 AC116337.2-201ENST00000477662 156 ntBASIC0.4□□□□□ -2.35
CSMD3Q7Z407 AC108729.1-201ENST00000487812 947 ntBASIC0.4□□□□□ -2.35
CSMD3Q7Z407 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.4□□□□□ -2.35
CSMD3Q7Z407 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.4□□□□□ -2.35
CSMD3Q7Z407 AP001485.1-201ENST00000604799 199 ntBASIC0.4□□□□□ -2.35
CSMD3Q7Z407 MTCO1P23-201ENST00000415223 1526 ntBASIC0.4□□□□□ -2.35
CSMD3Q7Z407 RNU6-374P-201ENST00000364146 108 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 418 ms