Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AP001148.1-201ENST00000624124 2359 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 RNU1-35P-201ENST00000362782 153 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-552P-201ENST00000362869 119 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 Y_RNA.88-201ENST00000363029 99 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-116P-201ENST00000384042 109 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-903P-201ENST00000391270 109 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 OR9R1P-201ENST00000412200 877 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 OR6C66P-201ENST00000414917 930 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 YPEL5P1-201ENST00000419731 367 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 SNRPEP10-201ENST00000420249 274 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 MTATP6P23-201ENST00000440153 476 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 HMGN2P16-201ENST00000456802 261 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AC090525.1-201ENST00000479116 478 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AC069439.1-201ENST00000494739 167 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 SNORD60.2-201ENST00000516883 86 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-143P-201ENST00000516942 93 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 HPRT1P3-201ENST00000539521 576 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 ZNF192P1-203ENST00000565888 810 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AL138889.2-201ENST00000603883 242 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AC013553.2-201ENST00000604244 589 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 MIR7153-201ENST00000637758 57 ntBASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
KRT28Q7Z3Y7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AC004972.1-201ENST00000623934 2209 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RNA5SP289-201ENST00000362332 137 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-1167P-201ENST00000363227 94 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 SNORD56.3-201ENST00000363507 71 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-512P-201ENST00000364438 103 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 MIR512-1-201ENST00000384913 84 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 CISD1P1-201ENST00000393907 327 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AL354719.1-201ENST00000406535 843 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AL606923.1-201ENST00000406616 190 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 Z98742.3-201ENST00000418637 326 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 BX276092.3-201ENST00000424182 230 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RPL7P46-201ENST00000425129 740 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 TOMM20P4-201ENST00000427861 435 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 CALM1P1-201ENST00000442082 433 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 MTND4P18-201ENST00000447010 465 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AL118520.1-201ENST00000450770 291 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AC004801.2-202ENST00000463559 283 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 TRBV1-201ENST00000476502 284 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RPL39P36-201ENST00000490784 156 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RPS29P21-201ENST00000496272 170 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 EIF4EP3-201ENST00000498782 656 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 TTC39CP1-201ENST00000512513 755 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RNU1-61P-201ENST00000516107 151 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 BNIP3P30-201ENST00000601184 574 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 BNIP3P9-201ENST00000603714 553 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AC098826.3-201ENST00000603823 466 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AC010338.1-201ENST00000621823 717 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 CTSLP2-204ENST00000629029 392 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 AC024614.3-201ENST00000637860 256 ntBASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRT28Q7Z3Y7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AL021368.2-201ENST00000606125 5352 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-451P-201ENST00000362921 107 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AC080125.1-201ENST00000414888 684 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AC092573.2-201ENST00000434546 243 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AC112220.1-201ENST00000434628 355 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 TAAR7P-201ENST00000436141 242 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 HMGB1P31-201ENST00000437242 427 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 PIGFP3-201ENST00000441918 722 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AL160314.1-201ENST00000490836 438 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 RNA5SP290-201ENST00000517133 127 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AP005435.4-201ENST00000529514 284 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 AC118273.2-201ENST00000532092 465 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms