Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC011602.1-201ENST00000546484 331 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 OR1M4P-201ENST00000589199 287 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AC080078.3-201ENST00000605407 463 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AC123912.5-201ENST00000605470 343 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 MIR6748-201ENST00000610433 71 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AC099506.2-201ENST00000623074 221 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 RNA5SP196-201ENST00000625967 102 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AC068647.1-201ENST00000489539 2265 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AC007656.2-201ENST00000624902 4547 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 CUL1P1-201ENST00000509510 2425 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AC090740.1-201ENST00000623193 2262 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 MIR30E-201ENST00000362104 92 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 SNORD14B-201ENST00000364533 90 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 SNORA62-201ENST00000365493 153 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 SNORA40C-201ENST00000391285 128 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 Y_RNA.623-201ENST00000411128 95 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AC245054.2-201ENST00000415639 319 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 PGBD4P6-201ENST00000421501 610 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AC007560.1-201ENST00000426912 237 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 C4BPAP2-201ENST00000428434 478 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 RPS3AP46-201ENST00000448352 682 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 RPL12P25-201ENST00000455592 494 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 RNU7-152P-201ENST00000458982 64 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AC010401.1-201ENST00000463867 348 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 RPL21P13-201ENST00000488305 481 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AC116337.1-201ENST00000509680 687 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 RNU2-27P-201ENST00000516185 142 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-1016P-201ENST00000516689 94 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-572P-201ENST00000516724 80 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-1213P-201ENST00000517075 94 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AP003072.1-201ENST00000531740 145 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AL442663.2-201ENST00000554385 511 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AC087499.8-201ENST00000578406 226 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 MIR5690-201ENST00000583739 73 ntBASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCHD4Q6ZW05 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 FTLP6-201ENST00000355274 422 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 MIR369-201ENST00000362155 70 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 Y_RNA.132-201ENST00000363421 102 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-593P-201ENST00000364716 112 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 SNORD42.2-201ENST00000365570 69 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-1329P-201ENST00000365664 107 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 MIR30B-201ENST00000384850 88 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 ATG3P1-201ENST00000419507 911 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 RPS15AP6-201ENST00000420703 385 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AL139247.1-201ENST00000422768 325 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AL353729.1-201ENST00000425044 720 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 UBE2V1P4-201ENST00000425374 344 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 BRK1P2-201ENST00000442875 223 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 NDUFB1P2-201ENST00000449477 176 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 RPL30P15-201ENST00000457129 321 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 Y_RNA.653-201ENST00000459091 95 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AP002884.2-201ENST00000471647 395 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AC084357.1-201ENST00000473404 255 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AC002456.2-201ENST00000509356 380 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-1282P-201ENST00000516735 96 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 RNU1-54P-201ENST00000517181 120 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 HMGB1P14-201ENST00000557424 591 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 MIR6875-201ENST00000617506 72 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 MIR6076-201ENST00000617521 113 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 AP000553.6-201ENST00000641242 118 ntBASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.29□□□□□ -1.88
PTCHD4Q6ZW05 MFSD8-236ENST00000641509 4050 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms