Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.5□□□□□ -2.33
UBR3Q6ZT12 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC000111.3-201ENST00000433478 193 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 UBE2V2P3-201ENST00000433562 437 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC097499.1-201ENST00000444277 208 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC112492.4-201ENST00000456549 352 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 LRRC34P2-201ENST00000514850 553 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC034114.1-201ENST00000520293 285 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC105224.1-201ENST00000587055 421 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC010900.2-201ENST00000604508 210 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC055876.5-201ENST00000605667 259 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
UBR3Q6ZT12 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC023512.1-201ENST00000444513 499 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.5□□□□□ -2.33
UBR3Q6ZT12 MTCYBP16-201ENST00000509187 1129 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC093677.1-201ENST00000514414 678 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 RAB11AP2-201ENST00000545905 639 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC008121.1-201ENST00000603244 268 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC010738.1-201ENST00000604970 987 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC007349.4-201ENST00000608114 532 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC009974.1-201ENST00000608881 455 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AL355472.4-201ENST00000610233 626 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 MIR8074-201ENST00000615081 81 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC006213.4-201ENST00000616184 634 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AC083865.1-201ENST00000636634 831 ntBASIC0.5□□□□□ -2.33
UBR3Q6ZT12 AL591043.1-201ENST00000432461 424 ntBASIC0.49□□□□□ -2.33
UBR3Q6ZT12 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.49□□□□□ -2.33
UBR3Q6ZT12 SNORD116-28-201ENST00000516123 91 ntBASIC0.49□□□□□ -2.33
UBR3Q6ZT12 LINC00557-201ENST00000563184 1279 ntBASIC0.49□□□□□ -2.33
UBR3Q6ZT12 AL138963.2-201ENST00000605137 226 ntBASIC0.49□□□□□ -2.33
UBR3Q6ZT12 AL137246.1-201ENST00000607072 977 ntBASIC0.49□□□□□ -2.33
UBR3Q6ZT12 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.49□□□□□ -2.33
UBR3Q6ZT12 AP000238.1-201ENST00000608759 426 ntBASIC0.49□□□□□ -2.33
UBR3Q6ZT12 MTND4P12-201ENST00000498999 1377 ntBASIC0.49□□□□□ -2.33
UBR3Q6ZT12 RNU6-217P-201ENST00000384164 104 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 TAAR7P-201ENST00000436141 242 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 RNU6-902P-201ENST00000517212 91 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 OR5AK1P-201ENST00000524837 922 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AP003327.1-201ENST00000529684 127 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC090115.3-201ENST00000553218 849 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC009233.1-201ENST00000616477 371 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 RNU1-96P-201ENST00000364163 162 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 Y_RNA.412-201ENST00000384001 104 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 RNU4-31P-201ENST00000384211 141 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC007742.1-201ENST00000425789 329 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 ELOCP26-201ENST00000436067 329 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 PRPS1P1-201ENST00000445305 876 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC111000.5-201ENST00000506559 1178 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 DEFB108D-201ENST00000527787 222 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC005832.3-201ENST00000537929 631 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 EEF1B2P4-201ENST00000551398 348 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC007151.1-201ENST00000572774 483 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC026271.5-201ENST00000577873 130 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 7SK.7-201ENST00000603504 247 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC079791.1-201ENST00000605356 973 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 AC013468.1-201ENST00000608680 598 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 MIR6718-201ENST00000616153 80 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 MTND2P41-201ENST00000637599 773 ntBASIC0.48□□□□□ -2.33
UBR3Q6ZT12 RNU4-67P-201ENST00000364569 141 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
UBR3Q6ZT12 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
UBR3Q6ZT12 RNU6-750P-201ENST00000390946 107 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 RNA5SP299-201ENST00000391203 116 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 DSTNP4-201ENST00000399472 474 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 AL135790.2-201ENST00000437701 267 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 AC092757.1-201ENST00000467293 467 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 AC006512.1-201ENST00000468816 291 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 RPL30P6-201ENST00000475925 342 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 RNU6-27P-201ENST00000516146 107 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.47□□□□□ -2.33
UBR3Q6ZT12 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.47□□□□□ -2.33
UBR3Q6ZT12 AC019288.1-201ENST00000557918 224 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.47□□□□□ -2.33
UBR3Q6ZT12 AL049641.1-201ENST00000441055 1948 ntBASIC0.47□□□□□ -2.33
UBR3Q6ZT12 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 SNORD1A-201ENST00000364968 72 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 MRPL35P1-201ENST00000404272 572 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 HMGB1P36-201ENST00000487709 576 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC079140.2-201ENST00000506193 142 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.46□□□□□ -2.34
UBR3Q6ZT12 AC025588.3-201ENST00000604182 274 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms