Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 MTND5P27-201ENST00000428871 1720 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.396-201ENST00000383949 103 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 MIR514A1-201ENST00000385133 98 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 FO393415.2-201ENST00000480085 343 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AC022493.1-201ENST00000492984 337 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 RPL31P61-201ENST00000496160 376 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 MIR5188-201ENST00000583467 113 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AC078899.3-201ENST00000599065 212 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AC244505.7-201ENST00000599675 272 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AC123912.5-201ENST00000605470 343 ntBASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF40BQ6NWY9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.84□□□□□ -1.64
PRPF40BQ6NWY9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 AC018529.3-201ENST00000624212 2254 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 Y_RNA.257-201ENST00000364596 102 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 Y_RNA.461-201ENST00000384263 103 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 Y_RNA.526-201ENST00000384572 110 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-1025P-201ENST00000410629 104 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 RPS3AP46-201ENST00000448352 682 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 OR2AQ1P-201ENST00000451972 200 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 SNORA59A-201ENST00000459326 152 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 RNU7-169P-201ENST00000459456 61 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 AC107222.1-201ENST00000510899 637 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 RNU1-86P-201ENST00000516108 154 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 RNU1-107P-201ENST00000516617 154 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 IGHV3-76-201ENST00000522465 295 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 TRAV37-201ENST00000553906 342 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 AL139395.1-201ENST00000603662 160 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PRPF40BQ6NWY9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 AC027290.2-201ENST00000623210 18662 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 RNY3P11-201ENST00000364153 102 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-335P-201ENST00000364563 113 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 RN7SKP177-201ENST00000410567 355 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-1037P-201ENST00000459571 107 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 AC133134.1-201ENST00000466800 359 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 HMGN2P13-201ENST00000476476 274 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 SNORA31.20-201ENST00000517111 133 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 AC144568.1-201ENST00000520139 137 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 AL161798.1-201ENST00000604630 131 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 MTND4LP5-201ENST00000605152 292 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 AC131238.1-201ENST00000617135 328 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 BMS1P21-201ENST00000634565 365 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 MTND5P7-201ENST00000413558 1798 ntBASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PRPF40BQ6NWY9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 DEFB108F-201ENST00000344638 222 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 U3.15-201ENST00000365398 212 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 MIR628-201ENST00000385229 95 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 RNA5SP104-201ENST00000410989 118 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 EI24P1-201ENST00000416584 867 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 AL158156.1-201ENST00000422509 473 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 RPS24P13-201ENST00000442520 397 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 RPL21P11-201ENST00000461458 483 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 AC004584.2-201ENST00000570407 410 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 MIR5187-201ENST00000583479 76 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms