Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL122016.1-201ENST00000403365 367 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RNU2-49P-201ENST00000410666 184 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RAB28P1-201ENST00000411517 641 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC096649.2-201ENST00000416186 393 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 PDCL2P1-201ENST00000419302 352 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AL353678.1-201ENST00000422735 741 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RSL24D1P6-201ENST00000426934 401 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AL161651.1-201ENST00000440882 223 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RPL23AP45-201ENST00000476406 468 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RNU6-875P-201ENST00000516488 106 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 SCOCP1-201ENST00000554676 349 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC136624.4-201ENST00000573044 370 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC100830.2-201ENST00000581636 240 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC023043.2-201ENST00000589678 1026 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC107294.3-201ENST00000609211 526 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 uc_338.5-201ENST00000611839 155 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 FP236240.3-201ENST00000623061 327 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC005858.4-201ENST00000623191 700 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RNA5SP196-201ENST00000625967 102 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 SNORA50A-202ENST00000629536 136 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 AC004944.1-201ENST00000517807 3059 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF220Q5VTB9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF220Q5VTB9 SNORD56.3-201ENST00000363507 71 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 Y_RNA.212-201ENST00000364177 102 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 RNA5SP139-201ENST00000364340 117 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 RNU6-750P-201ENST00000390946 107 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC093578.1-201ENST00000415219 368 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC093151.1-201ENST00000427711 313 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 RPL32P28-201ENST00000443577 397 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC093663.1-201ENST00000497190 394 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC010265.1-201ENST00000513509 211 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 RNU6-507P-201ENST00000516045 100 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AP006245.1-201ENST00000522549 120 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AP005597.4-201ENST00000526762 229 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC087499.8-201ENST00000578406 226 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC020895.1-201ENST00000595362 272 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC024153.1-201ENST00000603103 365 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC011890.2-201ENST00000613393 294 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AP000553.6-201ENST00000641242 118 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF220Q5VTB9 AC091564.4-201ENST00000533934 2194 ntBASIC3.42□□□□□ -1.86
RNF220Q5VTB9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 Y_RNA.70-201ENST00000362886 110 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 RNU6-942P-201ENST00000363002 107 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 Y_RNA.142-201ENST00000363491 102 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 RNA5SP283-201ENST00000365604 119 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 RNU6-1106P-201ENST00000390845 107 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 UBE2V1P4-201ENST00000425374 344 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AL591419.1-201ENST00000427423 339 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 HMGN1P18-201ENST00000457642 277 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 RN7SL283P-201ENST00000489055 303 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 RPS27P26-201ENST00000494583 239 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 RNU6-273P-201ENST00000516937 96 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 COPS8P3-201ENST00000526024 482 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC026371.1-201ENST00000551867 419 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC007151.1-201ENST00000572774 483 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 MIR4286-201ENST00000580651 93 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC091135.1-201ENST00000585943 307 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC005261.5-201ENST00000596280 355 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC009994.1-201ENST00000606889 253 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 ZYXP1-201ENST00000617638 118 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC010378.1-201ENST00000619270 362 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AL354798.1-201ENST00000622505 329 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 AC010889.1-201ENST00000566193 2666 ntBASIC3.41□□□□□ -1.86
RNF220Q5VTB9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF220Q5VTB9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RNF220Q5VTB9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RNF220Q5VTB9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms