Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AC025445.1-201ENST00000502728 300 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 SNORA25.11-201ENST00000515935 105 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AC109329.1-201ENST00000518744 317 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AC107016.1-201ENST00000550463 337 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AC090517.1-201ENST00000569307 266 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AC015912.2-201ENST00000571053 181 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 RPS29P30-201ENST00000600975 111 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AC062037.2-201ENST00000610137 73 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AC064801.1-201ENST00000612025 407 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AL159153.1-201ENST00000619688 317 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 MIR7154-201ENST00000620673 73 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AC097372.5-201ENST00000623665 376 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 AC241585.2-209ENST00000638217 143 ntBASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNAP47Q5SQN1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 Y_RNA.214-201ENST00000364201 112 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 RNU6-1035P-201ENST00000384477 107 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 SNORA70C-201ENST00000384538 135 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 MIR93-201ENST00000385024 80 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 SNORA12.2-201ENST00000391040 156 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 ELOCP20-201ENST00000422460 345 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 FCF1P4-201ENST00000448326 183 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 RPL23AP14-201ENST00000468281 468 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 UQCRHP4-201ENST00000471686 272 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 RNY3P15-201ENST00000516297 97 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 TVP23BP1-201ENST00000557500 617 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC007224.1-201ENST00000564410 144 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC104581.2-201ENST00000572227 430 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC091178.1-203ENST00000584586 279 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC060766.3-201ENST00000591442 263 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC020895.1-201ENST00000595362 272 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC006557.5-201ENST00000603126 811 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AC113403.1-201ENST00000604910 193 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 MIR6134-201ENST00000617606 109 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 AL445567.2-201ENST00000618935 498 ntBASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SNAP47Q5SQN1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 Y_RNA.405-201ENST00000383979 100 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 Y_RNA.451-201ENST00000384200 100 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 RNU6-472P-201ENST00000384299 107 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 Y_RNA.524-201ENST00000384564 100 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 Y_RNA.561-201ENST00000384694 100 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 RPS26P8-201ENST00000393490 348 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 MIR190B-201ENST00000401119 79 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 RNA5SP104-201ENST00000410989 118 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 RNA5SP39-201ENST00000411245 120 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 RAC1P3-201ENST00000416129 580 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 USP9YP16-201ENST00000430287 407 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 USP9YP23-201ENST00000455085 407 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 RPS4XP13-201ENST00000483219 789 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 RN7SKP21-201ENST00000516503 220 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 AC034114.1-201ENST00000520293 285 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 IGHV3-76-201ENST00000522465 295 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 AC125232.2-201ENST00000592457 143 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 ZYXP1-201ENST00000617638 118 ntBASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SNAP47Q5SQN1 AC243829.7-201ENST00000633081 225 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms