Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 MRPS36P5-201ENST00000551909 298 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 RPL21P5-201ENST00000554662 472 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC012414.6-201ENST00000568241 401 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 MYL12BP1-201ENST00000569826 507 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC078899.2-201ENST00000595282 212 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AL359999.1-201ENST00000604513 294 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC009318.2-201ENST00000610917 651 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC138749.5-201ENST00000611461 208 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.15-201ENST00000611544 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC005332.10-201ENST00000612725 619 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.16-201ENST00000613119 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.12-201ENST00000613778 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.20-201ENST00000613956 192 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC008250.2-201ENST00000615261 205 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.9-201ENST00000615427 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.11-201ENST00000616345 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.2-201ENST00000616535 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC116165.2-201ENST00000616705 206 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.3-201ENST00000617785 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.19-201ENST00000618602 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 RNU2-1-201ENST00000618664 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.6-201ENST00000619225 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.5-201ENST00000619465 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 U2.10-201ENST00000620268 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC099654.13-201ENST00000639774 207 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 RNU5E-1-201ENST00000362477 120 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 U3.4-201ENST00000363352 213 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 RNU6-511P-201ENST00000363496 107 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 RNA5SP99-201ENST00000364020 114 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 RNY4P34-201ENST00000364779 95 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 SMIM11P1-201ENST00000369586 178 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 Y_RNA.598-201ENST00000410480 95 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 AC092809.3-201ENST00000415453 231 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 GPM6BP2-201ENST00000432046 144 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 USP9YP15-201ENST00000442391 422 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 TAF9P1-201ENST00000445421 515 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 GPM6BP1-201ENST00000446387 144 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 TAF9P2-201ENST00000454958 515 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 RPL37P6-201ENST00000460682 294 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 RNU6-1220P-201ENST00000517126 108 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 MIR4658-201ENST00000584344 65 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 BNIP3P8-201ENST00000597863 560 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 CLIC4P2-201ENST00000601934 717 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 AC025048.6-202ENST00000627667 438 ntBASIC2.57□□□□□ -2
SHROOM1Q2M3G4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.57□□□□□ -2
SHROOM1Q2M3G4 RNU4-1-201ENST00000363925 141 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 RNU6-39P-201ENST00000384344 107 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 RNU2-49P-201ENST00000410666 184 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 NDUFS5P4-201ENST00000412983 318 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC006366.1-201ENST00000422002 759 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AL592045.1-201ENST00000429867 352 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 RPL36AP53-201ENST00000432891 316 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.56□□□□□ -2
SHROOM1Q2M3G4 RNU2-46P-201ENST00000517038 113 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC078814.3-201ENST00000553036 491 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC105137.2-201ENST00000569073 466 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC008088.1-201ENST00000580993 280 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 Z99497.2-201ENST00000603634 310 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC130324.3-201ENST00000614165 542 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.56□□□□□ -2
SHROOM1Q2M3G4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AC110994.2-201ENST00000635481 492 ntBASIC2.56□□□□□ -2
SHROOM1Q2M3G4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHROOM1Q2M3G4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.56□□□□□ -2
SHROOM1Q2M3G4 AL356292.1-201ENST00000283110 373 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 SNORD56.2-201ENST00000363242 71 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 RNU5E-6P-201ENST00000365574 115 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 RNY3P10-201ENST00000384764 102 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 SNORA40.3-201ENST00000390964 122 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC009518.2-201ENST00000418056 731 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 TOMM20P4-201ENST00000427861 435 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms