Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.42□□□□□ -2.18
FOXF1Q12946 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
FOXF1Q12946 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
FOXF1Q12946 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
FOXF1Q12946 RNA5SP125-201ENST00000364843 120 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 MIR218-1-201ENST00000384999 110 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 RNU6-817P-201ENST00000391083 104 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 RNA5SP270-201ENST00000411361 118 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXF1Q12946 AL109913.1-201ENST00000421173 514 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.41□□□□□ -2.18
FOXF1Q12946 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.41□□□□□ -2.18
FOXF1Q12946 RPL37P6-201ENST00000460682 294 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXF1Q12946 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXF1Q12946 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXF1Q12946 RNA5SP112-201ENST00000515937 99 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 RNU6-390P-201ENST00000516259 103 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 RNU6-64P-201ENST00000517119 105 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 RNA5SP165-201ENST00000517142 115 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 AP004247.1-201ENST00000531556 1289 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXF1Q12946 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXF1Q12946 AC006199.1-201ENST00000548728 219 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
FOXF1Q12946 AC015712.3-201ENST00000559380 164 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXF1Q12946 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXF1Q12946 MIR4287-201ENST00000579398 78 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 MIR4765-201ENST00000585007 77 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXF1Q12946 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXF1Q12946 AC097468.3-201ENST00000607956 456 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 AC024581.2-201ENST00000619986 252 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 AP000484.1-201ENST00000620067 1252 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
FOXF1Q12946 AL359854.1-201ENST00000614203 1594 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 AC008555.8-201ENST00000623602 2168 ntBASIC1.41□□□□□ -2.18
FOXF1Q12946 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.41□□□□□ -2.18
FOXF1Q12946 RNU6-1159P-201ENST00000362933 107 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.4□□□□□ -2.19
FOXF1Q12946 RNU6-1242P-201ENST00000391052 103 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 MTCO2P8-201ENST00000412213 658 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 RPS24P7-201ENST00000416921 246 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXF1Q12946 MTCO2P21-201ENST00000419780 677 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AC093106.2-201ENST00000428212 385 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 RPL30P4-201ENST00000429309 333 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXF1Q12946 GPM6BP2-201ENST00000432046 144 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 HSFY7P-201ENST00000432672 318 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 HSFY8P-201ENST00000437934 318 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 GPM6BP1-201ENST00000446387 144 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 RPL7P12-201ENST00000446719 750 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 PTENP1-201ENST00000447117 1215 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 CECR9-201ENST00000453421 199 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 HSFY5P-201ENST00000453726 309 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXF1Q12946 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXF1Q12946 PMCHL2-203ENST00000457791 237 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXF1Q12946 AC104685.1-201ENST00000502445 371 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.4□□□□□ -2.19
FOXF1Q12946 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
FOXF1Q12946 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.4□□□□□ -2.19
FOXF1Q12946 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXF1Q12946 MTND2P7-201ENST00000521337 640 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AP005435.4-201ENST00000529514 284 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AC118273.2-201ENST00000532092 465 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.4□□□□□ -2.19
FOXF1Q12946 DUXAP1-201ENST00000556632 463 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.4□□□□□ -2.19
FOXF1Q12946 MTND1P8-201ENST00000571424 950 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 MIR544B-201ENST00000582372 78 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AC091152.3-201ENST00000604227 325 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AL158042.1-201ENST00000605338 460 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AL355472.4-201ENST00000610233 626 ntBASIC1.4□□□□□ -2.19
FOXF1Q12946 AC092125.1-201ENST00000562568 1995 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 CDC27P3-201ENST00000635418 1910 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 NACAP2-201ENST00000318548 624 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 RNU6-188P-201ENST00000364207 107 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 RNU1-148P-201ENST00000384472 162 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 RNA5SP213-201ENST00000391031 106 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 RNU6-757P-201ENST00000410334 100 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.39□□□□□ -2.19
FOXF1Q12946 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.39□□□□□ -2.19
FOXF1Q12946 USP9YP6-201ENST00000413550 854 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXF1Q12946 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.39□□□□□ -2.19
FOXF1Q12946 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXF1Q12946 AL354692.1-201ENST00000423044 315 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXF1Q12946 AL353729.1-201ENST00000425044 720 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC104651.1-201ENST00000427559 735 ntBASIC1.39□□□□□ -2.19
FOXF1Q12946 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.39□□□□□ -2.19
FOXF1Q12946 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXF1Q12946 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 1173 ms