Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.18□□□□□ -1.74
SSRP1Q08945 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.18□□□□□ -1.74
SSRP1Q08945 Y_RNA.128-201ENST00000363391 112 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 Y_RNA.326-201ENST00000365176 113 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 RNU6-306P-201ENST00000384617 107 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 RNU6-1050P-201ENST00000410388 107 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 RN7SKP202-201ENST00000410439 330 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 Z99755.1-201ENST00000414048 380 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 HMGN2P30-201ENST00000423237 256 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.18□□□□□ -1.74
SSRP1Q08945 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.18□□□□□ -1.74
SSRP1Q08945 RPS3AP46-201ENST00000448352 682 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.18□□□□□ -1.74
SSRP1Q08945 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 SCARNA15.1-201ENST00000516384 125 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 MIR2114-201ENST00000516645 80 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.18□□□□□ -1.74
SSRP1Q08945 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SSRP1Q08945 AC011602.1-201ENST00000546484 331 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.18□□□□□ -1.74
SSRP1Q08945 H3F3AP1-201ENST00000559984 334 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 AMZ2P1-203ENST00000565833 850 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 MIR4782-201ENST00000577987 79 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.18□□□□□ -1.74
SSRP1Q08945 AL160281.1-201ENST00000605307 311 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 AL121772.2-201ENST00000614331 297 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SSRP1Q08945 AL353746.1-201ENST00000566293 6881 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 MTND5P10-201ENST00000603719 1809 ntBASIC4.18□□□□□ -1.74
SSRP1Q08945 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSRP1Q08945 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSRP1Q08945 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSRP1Q08945 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.17□□□□□ -1.74
SSRP1Q08945 AC002546.1-201ENST00000588041 2504 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSRP1Q08945 MIR369-201ENST00000362155 70 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSRP1Q08945 RNU6-1035P-201ENST00000384477 107 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 RNU6-310P-201ENST00000384655 107 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 RNU6-1106P-201ENST00000390845 107 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 MIR548P-201ENST00000408336 84 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 Y_RNA.594-201ENST00000410373 140 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 Y_RNA.646-201ENST00000410980 101 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 SNORD56-201ENST00000413522 71 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 RPL26P27-201ENST00000414397 437 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.17□□□□□ -1.74
SSRP1Q08945 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.17□□□□□ -1.74
SSRP1Q08945 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.17□□□□□ -1.74
SSRP1Q08945 MTATP6P7-201ENST00000453315 681 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 MTCO3P10-201ENST00000455912 772 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.17□□□□□ -1.74
SSRP1Q08945 RPL9P32-201ENST00000464118 620 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.17□□□□□ -1.74
SSRP1Q08945 RNU1-103P-201ENST00000516502 125 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 RNU6-579P-201ENST00000516879 102 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 RNU6-1213P-201ENST00000517075 94 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.17□□□□□ -1.74
SSRP1Q08945 HMGB1P14-201ENST00000557424 591 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.17□□□□□ -1.74
SSRP1Q08945 AC020661.2-201ENST00000560114 134 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 MIR4429-201ENST00000580105 73 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 AC006130.2-201ENST00000586202 326 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 AC008121.1-201ENST00000603244 268 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 AC009229.3-201ENST00000608056 282 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 AC019193.3-201ENST00000609144 554 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 AC007823.1-201ENST00000569932 1566 ntBASIC4.17□□□□□ -1.74
SSRP1Q08945 MTCO1P12-201ENST00000414273 1543 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.16□□□□□ -1.74
SSRP1Q08945 SNORA1.3-201ENST00000384676 136 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 MIR517A-201ENST00000385001 87 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 RPS4XP3-201ENST00000398541 413 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 MIR888-201ENST00000401186 77 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 AL030996.1-201ENST00000411430 235 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.16□□□□□ -1.74
SSRP1Q08945 AC093151.1-201ENST00000427711 313 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 AC097713.2-201ENST00000430199 356 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 RPL37P4-201ENST00000448908 268 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 HMGB3P8-201ENST00000449709 577 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.16□□□□□ -1.74
SSRP1Q08945 SNORD5.1-201ENST00000458800 75 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 AC018437.1-201ENST00000492214 406 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.16□□□□□ -1.74
SSRP1Q08945 Y_RNA.670-201ENST00000516255 105 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSRP1Q08945 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.16□□□□□ -1.74
SSRP1Q08945 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.16□□□□□ -1.74
SSRP1Q08945 AC022432.1-201ENST00000595739 310 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.16□□□□□ -1.74
SSRP1Q08945 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 AC244517.12-201ENST00000623581 663 ntBASIC4.16□□□□□ -1.74
SSRP1Q08945 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSRP1Q08945 MTND4P27-201ENST00000450813 1354 ntBASIC4.15□□□□□ -1.74
SSRP1Q08945 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SSRP1Q08945 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.15□□□□□ -1.74
SSRP1Q08945 MTND5P19-201ENST00000424872 1794 ntBASIC4.15□□□□□ -1.74
SSRP1Q08945 SNORD9-201ENST00000362566 104 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 RNU6-778P-201ENST00000363269 103 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 Y_RNA.151-201ENST00000363566 112 ntBASIC4.15□□□□□ -1.75
SSRP1Q08945 Y_RNA.197-201ENST00000364004 102 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms