Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.58□□□□□ -2
GABPAQ06546 RN7SKP32-201ENST00000410167 303 ntBASIC2.58□□□□□ -2
GABPAQ06546 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.58□□□□□ -2
GABPAQ06546 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.58□□□□□ -2
GABPAQ06546 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.58□□□□□ -2
GABPAQ06546 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.58□□□□□ -2
GABPAQ06546 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.58□□□□□ -2
GABPAQ06546 BX295541.1-201ENST00000417774 250 ntBASIC2.58□□□□□ -2
GABPAQ06546 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.58□□□□□ -2
GABPAQ06546 AL358075.3-201ENST00000426289 226 ntBASIC2.58□□□□□ -2
GABPAQ06546 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.58□□□□□ -2
GABPAQ06546 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.58□□□□□ -2
GABPAQ06546 AC009961.2-201ENST00000435771 251 ntBASIC2.58□□□□□ -2
GABPAQ06546 AC073614.1-201ENST00000438690 650 ntBASIC2.58□□□□□ -2
GABPAQ06546 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.58□□□□□ -2
GABPAQ06546 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.58□□□□□ -2
GABPAQ06546 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.58□□□□□ -2
GABPAQ06546 AL136380.1-201ENST00000447970 162 ntBASIC2.58□□□□□ -2
GABPAQ06546 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.58□□□□□ -2
GABPAQ06546 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.58□□□□□ -2
GABPAQ06546 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.58□□□□□ -2
GABPAQ06546 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.58□□□□□ -2
GABPAQ06546 MRPS36P2-201ENST00000512569 299 ntBASIC2.58□□□□□ -2
GABPAQ06546 RNU6-914P-201ENST00000516749 109 ntBASIC2.58□□□□□ -2
GABPAQ06546 SNORA18.6-201ENST00000516792 115 ntBASIC2.58□□□□□ -2
GABPAQ06546 SUB1P1-201ENST00000524415 382 ntBASIC2.58□□□□□ -2
GABPAQ06546 OR5B19P-201ENST00000531766 928 ntBASIC2.58□□□□□ -2
GABPAQ06546 AC087883.1-201ENST00000551882 391 ntBASIC2.58□□□□□ -2
GABPAQ06546 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.58□□□□□ -2
GABPAQ06546 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
GABPAQ06546 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
GABPAQ06546 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.58□□□□□ -2
GABPAQ06546 AC010620.1-201ENST00000601088 1102 ntBASIC2.58□□□□□ -2
GABPAQ06546 AP000787.2-201ENST00000604432 568 ntBASIC2.58□□□□□ -2
GABPAQ06546 AC090578.1-201ENST00000604955 591 ntBASIC2.58□□□□□ -2
GABPAQ06546 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
GABPAQ06546 MIR3199-2-201ENST00000636243 86 ntBASIC2.58□□□□□ -2
GABPAQ06546 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
GABPAQ06546 TEX21P-201ENST00000447107 1476 ntBASIC2.58□□□□□ -2
GABPAQ06546 RNU6-169P-201ENST00000365336 107 ntBASIC2.57□□□□□ -2
GABPAQ06546 MIR558-201ENST00000384920 94 ntBASIC2.57□□□□□ -2
GABPAQ06546 MIR301A-201ENST00000385261 86 ntBASIC2.57□□□□□ -2
GABPAQ06546 RNU2-39P-201ENST00000410604 198 ntBASIC2.57□□□□□ -2
GABPAQ06546 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.57□□□□□ -2
GABPAQ06546 RPL26P27-201ENST00000414397 437 ntBASIC2.57□□□□□ -2
GABPAQ06546 AL513477.1-202ENST00000417061 214 ntBASIC2.57□□□□□ -2
GABPAQ06546 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.57□□□□□ -2
GABPAQ06546 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.57□□□□□ -2
GABPAQ06546 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.57□□□□□ -2
GABPAQ06546 MTND1P27-201ENST00000451117 902 ntBASIC2.57□□□□□ -2
GABPAQ06546 UBL5P3-201ENST00000475112 231 ntBASIC2.57□□□□□ -2
GABPAQ06546 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.57□□□□□ -2
GABPAQ06546 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.57□□□□□ -2
GABPAQ06546 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.57□□□□□ -2
GABPAQ06546 AC008716.1-201ENST00000511084 513 ntBASIC2.57□□□□□ -2
GABPAQ06546 AC117532.1-201ENST00000514638 323 ntBASIC2.57□□□□□ -2
GABPAQ06546 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.57□□□□□ -2
GABPAQ06546 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.57□□□□□ -2
GABPAQ06546 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.57□□□□□ -2
GABPAQ06546 AC040904.1-201ENST00000590850 223 ntBASIC2.57□□□□□ -2
GABPAQ06546 AC073544.2-201ENST00000601155 540 ntBASIC2.57□□□□□ -2
GABPAQ06546 AL355598.1-201ENST00000604169 202 ntBASIC2.57□□□□□ -2
GABPAQ06546 MIR98-201ENST00000606724 119 ntBASIC2.57□□□□□ -2
GABPAQ06546 AC011939.3-201ENST00000613686 466 ntBASIC2.57□□□□□ -2
GABPAQ06546 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.57□□□□□ -2
GABPAQ06546 MIR219B-201ENST00000637023 88 ntBASIC2.57□□□□□ -2
GABPAQ06546 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.57□□□□□ -2
GABPAQ06546 AC110491.1-201ENST00000562191 2010 ntBASIC2.57□□□□□ -2
GABPAQ06546 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
GABPAQ06546 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
GABPAQ06546 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.57□□□□□ -2
GABPAQ06546 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.57□□□□□ -2
GABPAQ06546 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
GABPAQ06546 NACAP2-201ENST00000318548 624 ntBASIC2.56□□□□□ -2
GABPAQ06546 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
GABPAQ06546 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.56□□□□□ -2
GABPAQ06546 HMGN2P35-201ENST00000412164 270 ntBASIC2.56□□□□□ -2
GABPAQ06546 AL096701.2-201ENST00000416920 238 ntBASIC2.56□□□□□ -2
GABPAQ06546 MED13P1-201ENST00000428342 171 ntBASIC2.56□□□□□ -2
GABPAQ06546 HMGB1P9-201ENST00000429856 646 ntBASIC2.56□□□□□ -2
GABPAQ06546 AC244505.5-201ENST00000443639 207 ntBASIC2.56□□□□□ -2
GABPAQ06546 AL118520.1-201ENST00000450770 291 ntBASIC2.56□□□□□ -2
GABPAQ06546 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.56□□□□□ -2
GABPAQ06546 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.56□□□□□ -2
GABPAQ06546 MTND4P2-201ENST00000507767 1203 ntBASIC2.56□□□□□ -2
GABPAQ06546 AC117522.1-201ENST00000509821 380 ntBASIC2.56□□□□□ -2
GABPAQ06546 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.56□□□□□ -2
GABPAQ06546 SCARNA24.1-201ENST00000516465 137 ntBASIC2.56□□□□□ -2
GABPAQ06546 RNU6-703P-201ENST00000516946 107 ntBASIC2.56□□□□□ -2
GABPAQ06546 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.56□□□□□ -2
GABPAQ06546 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.56□□□□□ -2
GABPAQ06546 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.56□□□□□ -2
GABPAQ06546 AC119751.7-201ENST00000600494 245 ntBASIC2.56□□□□□ -2
GABPAQ06546 AL158827.2-201ENST00000602494 330 ntBASIC2.56□□□□□ -2
GABPAQ06546 MIR15A-201ENST00000607334 83 ntBASIC2.56□□□□□ -2
GABPAQ06546 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
GABPAQ06546 AL691447.3-201ENST00000635020 330 ntBASIC2.56□□□□□ -2
GABPAQ06546 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.56□□□□□ -2
GABPAQ06546 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.56□□□□□ -2
GABPAQ06546 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms