Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC244035.1-201ENST00000430042 390 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 MTND2P20-201ENST00000440805 661 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 ARPC3P5-201ENST00000448802 534 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.22□□□□□ -2.21
H3F3AP84243 RNU7-95P-201ENST00000459222 64 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 RNU6-775P-201ENST00000459318 96 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.22□□□□□ -2.21
H3F3AP84243 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.22□□□□□ -2.21
H3F3AP84243 AC114801.2-201ENST00000503825 781 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 AC098862.1-201ENST00000504991 413 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 AC116655.1-201ENST00000508324 901 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 AC093809.1-201ENST00000509155 340 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 AC121161.1-201ENST00000510606 652 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.22□□□□□ -2.21
H3F3AP84243 AC022784.5-201ENST00000522241 437 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 SLC2A13P1-201ENST00000531560 322 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.22□□□□□ -2.21
H3F3AP84243 DNAJC19P9-201ENST00000555084 351 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.22□□□□□ -2.21
H3F3AP84243 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.22□□□□□ -2.21
H3F3AP84243 AC091304.6-201ENST00000619761 202 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
H3F3AP84243 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
H3F3AP84243 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.21
H3F3AP84243 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
H3F3AP84243 RNA5SP501-201ENST00000410990 112 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 VN1R108P-201ENST00000431580 830 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 HMGB1P31-201ENST00000437242 427 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.21□□□□□ -2.22
H3F3AP84243 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.21□□□□□ -2.22
H3F3AP84243 RN7SKP210-201ENST00000459176 261 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.21□□□□□ -2.22
H3F3AP84243 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.21□□□□□ -2.22
H3F3AP84243 MTCYBP18-201ENST00000501056 747 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.21□□□□□ -2.22
H3F3AP84243 HMGB1P28-201ENST00000507778 552 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 RNU6-751P-201ENST00000516382 101 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 RNU6-586P-201ENST00000517265 104 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.21□□□□□ -2.22
H3F3AP84243 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.21□□□□□ -2.22
H3F3AP84243 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.21□□□□□ -2.22
H3F3AP84243 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.21□□□□□ -2.22
H3F3AP84243 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.21□□□□□ -2.22
H3F3AP84243 AC135279.1-201ENST00000543493 504 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.21□□□□□ -2.22
H3F3AP84243 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
H3F3AP84243 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
H3F3AP84243 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 BTF3L4P2-201ENST00000392798 346 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AL139397.2-201ENST00000404529 772 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.2□□□□□ -2.22
H3F3AP84243 BTF3P4-201ENST00000418852 495 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 USP9YP26-201ENST00000421008 661 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.2□□□□□ -2.22
H3F3AP84243 ISCA1P1-201ENST00000426679 387 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.2□□□□□ -2.22
H3F3AP84243 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.2□□□□□ -2.22
H3F3AP84243 AC118469.1-201ENST00000442943 488 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.2□□□□□ -2.22
H3F3AP84243 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.2□□□□□ -2.22
H3F3AP84243 AC245102.2-201ENST00000448956 180 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AC010631.1-201ENST00000474150 156 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.2□□□□□ -2.22
H3F3AP84243 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.2□□□□□ -2.22
H3F3AP84243 RNU6-583P-201ENST00000516012 92 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 SNORA48.9-201ENST00000516419 162 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AP003033.1-201ENST00000527244 415 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.2□□□□□ -2.22
H3F3AP84243 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.2□□□□□ -2.22
H3F3AP84243 HIGD1AP17-201ENST00000554576 276 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 LINC00557-201ENST00000563184 1279 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AC023813.2-201ENST00000564321 469 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AL353997.4-201ENST00000586196 166 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.2□□□□□ -2.22
H3F3AP84243 RPL30P11-203ENST00000598995 310 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 AL445435.1-201ENST00000604232 665 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
H3F3AP84243 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.2□□□□□ -2.22
H3F3AP84243 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.2□□□□□ -2.22
H3F3AP84243 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
H3F3AP84243 RBBP8P1-201ENST00000449447 1844 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
H3F3AP84243 AC138393.1-203ENST00000327086 343 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 RNU5B-1-201ENST00000363286 116 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 MIR518D-201ENST00000385014 87 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 MIR1262-201ENST00000408276 93 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 OR51A5P-201ENST00000415429 942 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.19□□□□□ -2.22
H3F3AP84243 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.19□□□□□ -2.22
H3F3AP84243 RPS29P23-201ENST00000458635 123 ntBASIC1.19□□□□□ -2.22
H3F3AP84243 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.19□□□□□ -2.22
H3F3AP84243 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.19□□□□□ -2.22
H3F3AP84243 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.19□□□□□ -2.22
H3F3AP84243 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms