Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-89P-201ENST00000606519 100 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AC019176.2-201ENST00000611579 315 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.63□□□□□ -1.99
CX3CL1P78423 MIR3199-2-201ENST00000636243 86 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 Z83843.1-201ENST00000604070 3685 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CL1P78423 CDC27P3-201ENST00000635418 1910 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CL1P78423 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CL1P78423 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.62□□□□□ -1.99
CX3CL1P78423 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CX3CL1P78423 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CL1P78423 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CX3CL1P78423 AL049781.1-201ENST00000623195 3585 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 RNU6-522P-201ENST00000364497 107 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 MIR7-3-201ENST00000384898 110 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 MIR183-201ENST00000384958 110 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 MIR34A-201ENST00000385130 110 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 RNU6-750P-201ENST00000390946 107 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 RNA5SP354-201ENST00000391247 136 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.62□□□□□ -1.99
CX3CL1P78423 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CL1P78423 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CL1P78423 ERLEC1P1-201ENST00000433806 578 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 USP9YP28-201ENST00000435142 589 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CL1P78423 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.62□□□□□ -1.99
CX3CL1P78423 NFU1P2-201ENST00000448700 469 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AC092001.1-201ENST00000453012 261 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 RNU6-1208P-201ENST00000459588 107 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 Y_RNA.654-201ENST00000497848 106 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AF213884.2-201ENST00000510417 903 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 RNU6-581P-201ENST00000516214 105 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.62□□□□□ -1.99
CX3CL1P78423 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CL1P78423 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CL1P78423 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CL1P78423 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.62□□□□□ -1.99
CX3CL1P78423 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.62□□□□□ -1.99
CX3CL1P78423 MIR4444-1-201ENST00000581696 74 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 MIR4444-2-201ENST00000584390 74 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CL1P78423 VN1R80P-201ENST00000597126 338 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AC092747.3-201ENST00000603769 301 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 ATP1B3P1-201ENST00000605365 821 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AC087045.1-201ENST00000605856 382 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AC002044.1-201ENST00000606707 158 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AC092807.2-201ENST00000609367 243 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 MIR6075-201ENST00000620782 95 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.62□□□□□ -1.99
CX3CL1P78423 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.62□□□□□ -1.99
CX3CL1P78423 U6.105-201ENST00000637379 88 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AC110774.1-201ENST00000623567 2018 ntBASIC2.62□□□□□ -1.99
CX3CL1P78423 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.62□□□□□ -1.99
CX3CL1P78423 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CL1P78423 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.62□□□□□ -1.99
CX3CL1P78423 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CL1P78423 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CX3CL1P78423 SNORA71.3-201ENST00000362582 128 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 Y_RNA.167-201ENST00000363735 109 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 RNU6-82P-201ENST00000363970 107 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 RNU6-266P-201ENST00000364225 107 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 SNORA51.4-201ENST00000364993 124 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 RNU6-72P-201ENST00000384285 79 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 Y_RNA.480-201ENST00000384364 102 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 SAR1AP2-201ENST00000392696 594 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CL1P78423 POLHP1-201ENST00000411806 470 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.61□□□□□ -1.99
CX3CL1P78423 RPLP0P7-201ENST00000416050 667 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 AL353678.1-201ENST00000422735 741 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 SRIP2-201ENST00000428470 166 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CL1P78423 AC244505.4-201ENST00000434905 287 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.61□□□□□ -1.99
CX3CL1P78423 CST9LP2-201ENST00000437612 320 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 SSXP5-201ENST00000443473 287 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CL1P78423 snoU109.2-201ENST00000459316 135 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 RPS29P12-201ENST00000460178 152 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 AC091179.1-201ENST00000461606 579 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 HMGN2P26-201ENST00000463169 339 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 AC087884.1-201ENST00000469738 328 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.61□□□□□ -1.99
CX3CL1P78423 AC069439.1-201ENST00000494739 167 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 MTCYBP18-201ENST00000501056 747 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CL1P78423 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CL1P78423 RNA5SP217-201ENST00000515959 91 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 RNU6-189P-201ENST00000516120 101 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 Y_RNA.687-201ENST00000516558 91 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 SNORA25.17-201ENST00000517184 124 ntBASIC2.61□□□□□ -1.99
CX3CL1P78423 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.61□□□□□ -1.99
CX3CL1P78423 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.61□□□□□ -1.99
CX3CL1P78423 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.61□□□□□ -1.99
CX3CL1P78423 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CL1P78423 MIR4506-201ENST00000584693 77 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms