Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-61P-201ENST00000365528 109 ntBASIC2.58□□□□□ -2
LMO4P61968 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.58□□□□□ -2
LMO4P61968 RNU6-1297P-201ENST00000384415 104 ntBASIC2.58□□□□□ -2
LMO4P61968 SNORD116-29-201ENST00000384516 83 ntBASIC2.58□□□□□ -2
LMO4P61968 Y_RNA.530-201ENST00000384587 101 ntBASIC2.58□□□□□ -2
LMO4P61968 RNU1-101P-201ENST00000391171 127 ntBASIC2.58□□□□□ -2
LMO4P61968 SNORA75.4-201ENST00000391278 119 ntBASIC2.58□□□□□ -2
LMO4P61968 AL359634.1-202ENST00000404721 284 ntBASIC2.58□□□□□ -2
LMO4P61968 RNU4-14P-201ENST00000410858 122 ntBASIC2.58□□□□□ -2
LMO4P61968 RNU6-55P-201ENST00000411092 107 ntBASIC2.58□□□□□ -2
LMO4P61968 RNU6-954P-201ENST00000411355 107 ntBASIC2.58□□□□□ -2
LMO4P61968 AC114491.1-201ENST00000416095 246 ntBASIC2.58□□□□□ -2
LMO4P61968 AC093106.2-201ENST00000428212 385 ntBASIC2.58□□□□□ -2
LMO4P61968 RPL35AP22-201ENST00000436855 335 ntBASIC2.58□□□□□ -2
LMO4P61968 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.58□□□□□ -2
LMO4P61968 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.58□□□□□ -2
LMO4P61968 AC020550.1-201ENST00000447385 163 ntBASIC2.58□□□□□ -2
LMO4P61968 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.58□□□□□ -2
LMO4P61968 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.58□□□□□ -2
LMO4P61968 SNRPFP3-201ENST00000457792 225 ntBASIC2.58□□□□□ -2
LMO4P61968 RNU7-170P-201ENST00000459303 61 ntBASIC2.58□□□□□ -2
LMO4P61968 RNU6-1208P-201ENST00000459588 107 ntBASIC2.58□□□□□ -2
LMO4P61968 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.58□□□□□ -2
LMO4P61968 RNU6-559P-201ENST00000516151 98 ntBASIC2.58□□□□□ -2
LMO4P61968 SNORA25.17-201ENST00000517184 124 ntBASIC2.58□□□□□ -2
LMO4P61968 SNORA31.22-201ENST00000517204 135 ntBASIC2.58□□□□□ -2
LMO4P61968 AC009812.2-201ENST00000517657 457 ntBASIC2.58□□□□□ -2
LMO4P61968 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.58□□□□□ -2
LMO4P61968 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.58□□□□□ -2
LMO4P61968 H3F3AP1-201ENST00000559984 334 ntBASIC2.58□□□□□ -2
LMO4P61968 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.58□□□□□ -2
LMO4P61968 RPL23AP84-201ENST00000571193 464 ntBASIC2.58□□□□□ -2
LMO4P61968 MIR3171-201ENST00000584270 74 ntBASIC2.58□□□□□ -2
LMO4P61968 MIR3942-201ENST00000585264 109 ntBASIC2.58□□□□□ -2
LMO4P61968 AL627309.6-201ENST00000606857 840 ntBASIC2.58□□□□□ -2
LMO4P61968 AL133215.3-201ENST00000609801 448 ntBASIC2.58□□□□□ -2
LMO4P61968 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.58□□□□□ -2
LMO4P61968 uc_338.15-201ENST00000615470 191 ntBASIC2.58□□□□□ -2
LMO4P61968 U7.8-201ENST00000619968 63 ntBASIC2.58□□□□□ -2
LMO4P61968 AC090971.5-201ENST00000621102 293 ntBASIC2.58□□□□□ -2
LMO4P61968 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.58□□□□□ -2
LMO4P61968 AC134503.1-201ENST00000633048 54 ntBASIC2.58□□□□□ -2
LMO4P61968 MTND4LP32-201ENST00000636111 270 ntBASIC2.58□□□□□ -2
LMO4P61968 AC007496.3-201ENST00000624987 3443 ntBASIC2.58□□□□□ -2
LMO4P61968 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
LMO4P61968 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.58□□□□□ -2
LMO4P61968 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.57□□□□□ -2
LMO4P61968 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.57□□□□□ -2
LMO4P61968 SNORA80A-201ENST00000363922 136 ntBASIC2.57□□□□□ -2
LMO4P61968 Y_RNA.216-201ENST00000364205 93 ntBASIC2.57□□□□□ -2
LMO4P61968 Y_RNA.339-201ENST00000365325 102 ntBASIC2.57□□□□□ -2
LMO4P61968 SNORD42.2-201ENST00000365570 69 ntBASIC2.57□□□□□ -2
LMO4P61968 RNU6-474P-201ENST00000384243 107 ntBASIC2.57□□□□□ -2
LMO4P61968 Y_RNA.576-201ENST00000384781 102 ntBASIC2.57□□□□□ -2
LMO4P61968 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.57□□□□□ -2
LMO4P61968 RNU6-1197P-201ENST00000391183 107 ntBASIC2.57□□□□□ -2
LMO4P61968 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
LMO4P61968 MIR548P-201ENST00000408336 84 ntBASIC2.57□□□□□ -2
LMO4P61968 RNA5SP38-201ENST00000410750 119 ntBASIC2.57□□□□□ -2
LMO4P61968 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.57□□□□□ -2
LMO4P61968 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.57□□□□□ -2
LMO4P61968 RPS3AP52-201ENST00000435639 297 ntBASIC2.57□□□□□ -2
LMO4P61968 RPL36AP6-201ENST00000435770 321 ntBASIC2.57□□□□□ -2
LMO4P61968 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.57□□□□□ -2
LMO4P61968 GTF2IP13-201ENST00000438487 386 ntBASIC2.57□□□□□ -2
LMO4P61968 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.57□□□□□ -2
LMO4P61968 Y_RNA.639-201ENST00000458981 102 ntBASIC2.57□□□□□ -2
LMO4P61968 MTCO1P29-201ENST00000496868 288 ntBASIC2.57□□□□□ -2
LMO4P61968 AC097462.2-201ENST00000504623 481 ntBASIC2.57□□□□□ -2
LMO4P61968 RNU6-1170P-201ENST00000515974 106 ntBASIC2.57□□□□□ -2
LMO4P61968 SNORD59.2-201ENST00000516873 68 ntBASIC2.57□□□□□ -2
LMO4P61968 RNU6-273P-201ENST00000516937 96 ntBASIC2.57□□□□□ -2
LMO4P61968 RNU6-1092P-201ENST00000516955 87 ntBASIC2.57□□□□□ -2
LMO4P61968 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.57□□□□□ -2
LMO4P61968 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.57□□□□□ -2
LMO4P61968 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.57□□□□□ -2
LMO4P61968 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.57□□□□□ -2
LMO4P61968 MIR4425-201ENST00000580572 84 ntBASIC2.57□□□□□ -2
LMO4P61968 AC093838.1-201ENST00000613014 469 ntBASIC2.57□□□□□ -2
LMO4P61968 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.57□□□□□ -2
LMO4P61968 AL359757.2-201ENST00000624309 274 ntBASIC2.57□□□□□ -2
LMO4P61968 AC091903.1-201ENST00000624322 454 ntBASIC2.57□□□□□ -2
LMO4P61968 U6.114-201ENST00000636407 96 ntBASIC2.57□□□□□ -2
LMO4P61968 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
LMO4P61968 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.57□□□□□ -2
LMO4P61968 MTND4P27-201ENST00000450813 1354 ntBASIC2.57□□□□□ -2
LMO4P61968 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.57□□□□□ -2
LMO4P61968 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
LMO4P61968 AC121333.1-201ENST00000567488 2709 ntBASIC2.56□□□□□ -2
LMO4P61968 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.56□□□□□ -2
LMO4P61968 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 AC093908.1-201ENST00000623125 8092 ntBASIC2.56□□□□□ -2
LMO4P61968 FAM35BP-202ENST00000497389 3337 ntBASIC2.56□□□□□ -2
LMO4P61968 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.56□□□□□ -2
LMO4P61968 MIR369-201ENST00000362155 70 ntBASIC2.56□□□□□ -2
LMO4P61968 MIR22-201ENST00000362190 85 ntBASIC2.56□□□□□ -2
LMO4P61968 SNORA4.3-201ENST00000365564 137 ntBASIC2.56□□□□□ -2
LMO4P61968 MIR606-201ENST00000384851 96 ntBASIC2.56□□□□□ -2
LMO4P61968 MIR514A1-201ENST00000385133 98 ntBASIC2.56□□□□□ -2
LMO4P61968 RNY4P36-201ENST00000391116 96 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms