Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.87□□□□□ -1.95
CLDN20P56880 AC010099.1-201ENST00000455434 375 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.87□□□□□ -1.95
CLDN20P56880 snoU13.28-201ENST00000459235 104 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.87□□□□□ -1.95
CLDN20P56880 AC116353.2-201ENST00000505332 712 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 RNU2-69P-201ENST00000516061 100 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 RNU6-703P-201ENST00000516946 107 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.87□□□□□ -1.95
CLDN20P56880 AF235103.2-201ENST00000525753 346 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 CENPUP1-201ENST00000526649 1202 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.87□□□□□ -1.95
CLDN20P56880 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.87□□□□□ -1.95
CLDN20P56880 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.87□□□□□ -1.95
CLDN20P56880 MIR5004-201ENST00000579078 107 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 MIR3200-201ENST00000580767 85 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 MIR3941-201ENST00000582572 103 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 AC012493.2-201ENST00000595083 291 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 AL035413.2-201ENST00000604801 525 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.87□□□□□ -1.95
CLDN20P56880 uc_338.25-201ENST00000613756 156 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 U6.42-201ENST00000618440 107 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 MIR8057-201ENST00000620957 69 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 AC006504.8-201ENST00000621046 635 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.87□□□□□ -1.95
CLDN20P56880 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.87□□□□□ -1.95
CLDN20P56880 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLDN20P56880 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.86□□□□□ -1.95
CLDN20P56880 RNU6-1179P-201ENST00000384667 107 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.86□□□□□ -1.95
CLDN20P56880 RPL30P16-201ENST00000419341 429 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.86□□□□□ -1.95
CLDN20P56880 PRPS1P1-201ENST00000445305 876 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 RPL37P4-201ENST00000448908 268 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.86□□□□□ -1.95
CLDN20P56880 MTATP6P7-201ENST00000453315 681 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.86□□□□□ -1.95
CLDN20P56880 AC091179.1-201ENST00000461606 579 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 HMGN2P26-201ENST00000463169 339 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 HMGN2P13-201ENST00000476476 274 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 HMGB1P30-201ENST00000492455 606 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 AC026801.1-201ENST00000497178 464 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 Y_RNA.654-201ENST00000497848 106 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 MTCYBP18-201ENST00000501056 747 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.86□□□□□ -1.95
CLDN20P56880 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.86□□□□□ -1.95
CLDN20P56880 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.86□□□□□ -1.95
CLDN20P56880 RNU1-103P-201ENST00000516502 125 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 AC007536.1-201ENST00000533382 349 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 OR11H5P-201ENST00000554039 926 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 AC073539.2-201ENST00000597113 165 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 AC069234.5-201ENST00000611056 416 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 U2.17-201ENST00000611454 95 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLDN20P56880 AC018692.3-201ENST00000623929 123 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 AC022418.1-201ENST00000624118 445 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 AC091903.1-201ENST00000624322 454 ntBASIC2.86□□□□□ -1.95
CLDN20P56880 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLDN20P56880 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.86□□□□□ -1.95
CLDN20P56880 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.85□□□□□ -1.95
CLDN20P56880 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AC093908.1-201ENST00000623125 8092 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN20P56880 AC110774.1-201ENST00000623567 2018 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN20P56880 RNU1-73P-201ENST00000383971 164 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 RNA5SP252-201ENST00000391131 119 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 RNU6-332P-201ENST00000391193 108 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 SNORA40C-201ENST00000391285 128 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.85□□□□□ -1.95
CLDN20P56880 NDUFS5P4-201ENST00000412983 318 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 BX682237.1-201ENST00000415016 335 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AL353621.1-201ENST00000418219 243 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 HSPE1P1-201ENST00000421494 318 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 SKA2P1-201ENST00000425592 390 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN20P56880 RPL23AP83-201ENST00000434984 473 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AL121601.2-201ENST00000438019 707 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN20P56880 NDUFB1P2-201ENST00000449477 176 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 RNU7-167P-201ENST00000459160 62 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 RNU6-1208P-201ENST00000459588 107 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.85□□□□□ -1.95
CLDN20P56880 RPL21P93-201ENST00000480465 489 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.85□□□□□ -1.95
CLDN20P56880 MTND4LP22-201ENST00000508209 276 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.85□□□□□ -1.95
CLDN20P56880 AC074344.1-201ENST00000512823 224 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 RNU6-572P-201ENST00000516724 80 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 SNORA31.19-201ENST00000517079 126 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AC118273.2-201ENST00000532092 465 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AL118558.2-201ENST00000556294 238 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AL391261.3-201ENST00000557194 520 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 H3F3AP1-201ENST00000559984 334 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 UBL5P2-201ENST00000583788 219 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AC012119.1-201ENST00000603184 222 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 AL591516.1-201ENST00000611326 274 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms