Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.11□□□□□ -1.75
EPHB4P54760 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.11□□□□□ -1.75
EPHB4P54760 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EPHB4P54760 AL365440.1-201ENST00000436135 2167 ntBASIC4.11□□□□□ -1.75
EPHB4P54760 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
EPHB4P54760 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
EPHB4P54760 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
EPHB4P54760 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.1□□□□□ -1.75
EPHB4P54760 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB4P54760 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB4P54760 RNU6-1059P-201ENST00000363752 98 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
EPHB4P54760 Y_RNA.396-201ENST00000383949 103 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 RNU6-823P-201ENST00000391042 103 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 SNORA48.5-201ENST00000391143 135 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 RPS4XP7-201ENST00000406274 780 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.1□□□□□ -1.75
EPHB4P54760 AC002075.2-201ENST00000425207 252 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 MTCO3P45-201ENST00000443036 613 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 BX276092.4-201ENST00000452056 248 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.1□□□□□ -1.75
EPHB4P54760 SNORD105B-201ENST00000458770 79 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 AC008481.1-201ENST00000463278 396 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 RPL21P10-201ENST00000463521 490 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 RN7SL807P-201ENST00000470923 297 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 RPL22P13-201ENST00000493291 347 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.1□□□□□ -1.75
EPHB4P54760 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.1□□□□□ -1.75
EPHB4P54760 AC096745.1-201ENST00000509945 370 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 RNU4-60P-201ENST00000517239 135 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 AC100870.1-201ENST00000522035 505 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.1□□□□□ -1.75
EPHB4P54760 AC025423.5-201ENST00000550230 219 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.1□□□□□ -1.75
EPHB4P54760 AL365434.2-201ENST00000607979 234 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 AC006065.5-201ENST00000623427 349 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 AC110801.1-201ENST00000623590 212 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 AC138627.2-201ENST00000624202 601 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
EPHB4P54760 CEP170P1-201ENST00000502249 4587 ntBASIC4.1□□□□□ -1.75
EPHB4P54760 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.1□□□□□ -1.75
EPHB4P54760 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.1□□□□□ -1.75
EPHB4P54760 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EPHB4P54760 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.09□□□□□ -1.75
EPHB4P54760 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EPHB4P54760 RNU4-65P-201ENST00000410473 140 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 RNU2-23P-201ENST00000410545 195 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 RNU4-61P-201ENST00000411243 107 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 RPL31P2-201ENST00000413849 377 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 AC243428.1-201ENST00000421099 264 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.09□□□□□ -1.75
EPHB4P54760 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.09□□□□□ -1.75
EPHB4P54760 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.09□□□□□ -1.75
EPHB4P54760 AC234775.1-201ENST00000454247 670 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 RNY3P15-201ENST00000516297 97 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 Vault.1-201ENST00000516474 102 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 RNU4-77P-201ENST00000516692 156 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 IGKV2D-36-201ENST00000518643 226 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.09□□□□□ -1.75
EPHB4P54760 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.09□□□□□ -1.75
EPHB4P54760 HSBP1P1-201ENST00000555205 166 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.09□□□□□ -1.75
EPHB4P54760 AC090877.1-201ENST00000561418 344 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.09□□□□□ -1.75
EPHB4P54760 AL512605.2-201ENST00000592972 256 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 AC012493.2-201ENST00000595083 291 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 AC011494.1-201ENST00000596454 237 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 AC006077.1-201ENST00000604746 343 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 AL161423.1-201ENST00000613700 262 ntBASIC4.09□□□□□ -1.75
EPHB4P54760 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.09□□□□□ -1.75
EPHB4P54760 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.09□□□□□ -1.75
EPHB4P54760 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EPHB4P54760 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.09□□□□□ -1.76
EPHB4P54760 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
EPHB4P54760 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
EPHB4P54760 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
EPHB4P54760 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
EPHB4P54760 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
EPHB4P54760 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
EPHB4P54760 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
EPHB4P54760 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.08□□□□□ -1.76
EPHB4P54760 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
EPHB4P54760 Y_RNA.424-201ENST00000384063 103 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 Y_RNA.447-201ENST00000384184 113 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 RNU6-339P-201ENST00000384310 107 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 Y_RNA.510-201ENST00000384511 114 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
EPHB4P54760 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
EPHB4P54760 MRPS18CP6-201ENST00000423587 223 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
EPHB4P54760 GAPDHP27-201ENST00000447427 1020 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 AL353752.1-201ENST00000454946 260 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.08□□□□□ -1.76
EPHB4P54760 SNORD5.1-201ENST00000458800 75 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 AC010631.1-201ENST00000474150 156 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 AP000926.1-201ENST00000479573 241 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 AC009901.1-201ENST00000506703 541 ntBASIC4.08□□□□□ -1.76
EPHB4P54760 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.08□□□□□ -1.76
EPHB4P54760 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms