Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC243428.1-201ENST00000421099 264 ntBASIC3.59□□□□□ -1.83
CLK3P49761 AC002075.2-201ENST00000425207 252 ntBASIC3.59□□□□□ -1.83
CLK3P49761 RPL7P2-201ENST00000427639 268 ntBASIC3.59□□□□□ -1.83
CLK3P49761 AL591704.1-201ENST00000432574 275 ntBASIC3.59□□□□□ -1.83
CLK3P49761 OR4C10P-201ENST00000434991 931 ntBASIC3.59□□□□□ -1.83
CLK3P49761 AL359672.1-201ENST00000442302 409 ntBASIC3.59□□□□□ -1.83
CLK3P49761 AC112492.4-201ENST00000456549 352 ntBASIC3.59□□□□□ -1.83
CLK3P49761 AC008481.1-201ENST00000463278 396 ntBASIC3.59□□□□□ -1.83
CLK3P49761 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.59□□□□□ -1.83
CLK3P49761 AC096745.1-201ENST00000509945 370 ntBASIC3.59□□□□□ -1.83
CLK3P49761 RNA5SP384-201ENST00000516615 116 ntBASIC3.59□□□□□ -1.83
CLK3P49761 RNU4-77P-201ENST00000516692 156 ntBASIC3.59□□□□□ -1.83
CLK3P49761 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLK3P49761 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.59□□□□□ -1.83
CLK3P49761 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.59□□□□□ -1.83
CLK3P49761 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.59□□□□□ -1.83
CLK3P49761 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLK3P49761 AC174048.1-201ENST00000603389 144 ntBASIC3.59□□□□□ -1.83
CLK3P49761 AL161423.1-201ENST00000613700 262 ntBASIC3.59□□□□□ -1.83
CLK3P49761 AC007998.5-201ENST00000622938 237 ntBASIC3.59□□□□□ -1.83
CLK3P49761 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.59□□□□□ -1.83
CLK3P49761 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.59□□□□□ -1.83
CLK3P49761 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.59□□□□□ -1.83
CLK3P49761 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.59□□□□□ -1.83
CLK3P49761 AL606534.2-204ENST00000635008 178 ntBASIC3.59□□□□□ -1.83
CLK3P49761 U6.98-201ENST00000637157 84 ntBASIC3.59□□□□□ -1.83
CLK3P49761 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
CLK3P49761 AC116096.1-201ENST00000566804 2314 ntBASIC3.59□□□□□ -1.84
CLK3P49761 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLK3P49761 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLK3P49761 MIR372-201ENST00000362225 67 ntBASIC3.58□□□□□ -1.84
CLK3P49761 Y_RNA.2-201ENST00000362330 96 ntBASIC3.58□□□□□ -1.84
CLK3P49761 RNU6-50P-201ENST00000362356 103 ntBASIC3.58□□□□□ -1.84
CLK3P49761 Y_RNA.39-201ENST00000362620 98 ntBASIC3.58□□□□□ -1.84
CLK3P49761 RNA5SP283-201ENST00000365604 119 ntBASIC3.58□□□□□ -1.84
CLK3P49761 Y_RNA.424-201ENST00000384063 103 ntBASIC3.58□□□□□ -1.84
CLK3P49761 RNU6-214P-201ENST00000384130 107 ntBASIC3.58□□□□□ -1.84
CLK3P49761 Y_RNA.447-201ENST00000384184 113 ntBASIC3.58□□□□□ -1.84
CLK3P49761 Y_RNA.512-201ENST00000384518 102 ntBASIC3.58□□□□□ -1.84
CLK3P49761 RNU6-55P-201ENST00000411092 107 ntBASIC3.58□□□□□ -1.84
CLK3P49761 CRYBB2P1-203ENST00000415709 538 ntBASIC3.58□□□□□ -1.84
CLK3P49761 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.58□□□□□ -1.84
CLK3P49761 USP9YP30-201ENST00000430729 455 ntBASIC3.58□□□□□ -1.84
CLK3P49761 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.58□□□□□ -1.84
CLK3P49761 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.58□□□□□ -1.84
CLK3P49761 NOTCH2P1-201ENST00000443481 624 ntBASIC3.58□□□□□ -1.84
CLK3P49761 GAPDHP27-201ENST00000447427 1020 ntBASIC3.58□□□□□ -1.84
CLK3P49761 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.58□□□□□ -1.84
CLK3P49761 FABP5P13-201ENST00000452144 328 ntBASIC3.58□□□□□ -1.84
CLK3P49761 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.58□□□□□ -1.84
CLK3P49761 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.58□□□□□ -1.84
CLK3P49761 AC009901.1-201ENST00000506703 541 ntBASIC3.58□□□□□ -1.84
CLK3P49761 SLC25A15P5-201ENST00000508033 253 ntBASIC3.58□□□□□ -1.84
CLK3P49761 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CLK3P49761 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.58□□□□□ -1.84
CLK3P49761 RNU6-120P-201ENST00000516077 103 ntBASIC3.58□□□□□ -1.84
CLK3P49761 RNU6-1143P-201ENST00000516125 104 ntBASIC3.58□□□□□ -1.84
CLK3P49761 RNU2-53P-201ENST00000516257 147 ntBASIC3.58□□□□□ -1.84
CLK3P49761 RNU6-840P-201ENST00000517275 65 ntBASIC3.58□□□□□ -1.84
CLK3P49761 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.58□□□□□ -1.84
CLK3P49761 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.58□□□□□ -1.84
CLK3P49761 AC053481.4-201ENST00000583164 216 ntBASIC3.58□□□□□ -1.84
CLK3P49761 SNORD58B-201ENST00000607313 66 ntBASIC3.58□□□□□ -1.84
CLK3P49761 AL359547.2-201ENST00000615810 418 ntBASIC3.58□□□□□ -1.84
CLK3P49761 MIR6875-201ENST00000617506 72 ntBASIC3.58□□□□□ -1.84
CLK3P49761 AC078938.1-201ENST00000620993 318 ntBASIC3.58□□□□□ -1.84
CLK3P49761 MIR8062-201ENST00000621515 85 ntBASIC3.58□□□□□ -1.84
CLK3P49761 AC110801.1-201ENST00000623590 212 ntBASIC3.58□□□□□ -1.84
CLK3P49761 RNA5SP196-201ENST00000625967 102 ntBASIC3.58□□□□□ -1.84
CLK3P49761 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.58□□□□□ -1.84
CLK3P49761 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.58□□□□□ -1.84
CLK3P49761 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLK3P49761 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.58□□□□□ -1.84
CLK3P49761 AL021368.2-201ENST00000606125 5352 ntBASIC3.57□□□□□ -1.84
CLK3P49761 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLK3P49761 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLK3P49761 DEFB108F-201ENST00000344638 222 ntBASIC3.57□□□□□ -1.84
CLK3P49761 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.57□□□□□ -1.84
CLK3P49761 Y_RNA.288-201ENST00000364854 92 ntBASIC3.57□□□□□ -1.84
CLK3P49761 Y_RNA.396-201ENST00000383949 103 ntBASIC3.57□□□□□ -1.84
CLK3P49761 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLK3P49761 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLK3P49761 AC110754.1-201ENST00000399740 601 ntBASIC3.57□□□□□ -1.84
CLK3P49761 SNORA3.3-201ENST00000408712 125 ntBASIC3.57□□□□□ -1.84
CLK3P49761 RNA5SP129-201ENST00000410276 118 ntBASIC3.57□□□□□ -1.84
CLK3P49761 RNU2-64P-201ENST00000411315 191 ntBASIC3.57□□□□□ -1.84
CLK3P49761 RNA5SP111-201ENST00000411386 101 ntBASIC3.57□□□□□ -1.84
CLK3P49761 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.57□□□□□ -1.84
CLK3P49761 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.57□□□□□ -1.84
CLK3P49761 MTND5P27-201ENST00000428871 1720 ntBASIC3.57□□□□□ -1.84
CLK3P49761 AL645568.3-201ENST00000433683 316 ntBASIC3.57□□□□□ -1.84
CLK3P49761 RPL23AP50-201ENST00000434149 455 ntBASIC3.57□□□□□ -1.84
CLK3P49761 OSTCP8-201ENST00000445117 448 ntBASIC3.57□□□□□ -1.84
CLK3P49761 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.57□□□□□ -1.84
CLK3P49761 RPL21P104-201ENST00000464143 478 ntBASIC3.57□□□□□ -1.84
CLK3P49761 AC008571.1-201ENST00000467232 300 ntBASIC3.57□□□□□ -1.84
CLK3P49761 AC087884.1-201ENST00000469738 328 ntBASIC3.57□□□□□ -1.84
CLK3P49761 HSPE1P6-201ENST00000479457 291 ntBASIC3.57□□□□□ -1.84
CLK3P49761 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.57□□□□□ -1.84
CLK3P49761 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms