Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RPL9P33-201ENST00000484311 566 ntBASIC2.52□□□□□ -2.01
CDX1P47902 AC092436.1-201ENST00000506450 503 ntBASIC2.52□□□□□ -2.01
CDX1P47902 AC091133.4-201ENST00000511142 308 ntBASIC2.52□□□□□ -2.01
CDX1P47902 SNORA74D-201ENST00000516404 141 ntBASIC2.52□□□□□ -2.01
CDX1P47902 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.52□□□□□ -2.01
CDX1P47902 OR5AQ1P-201ENST00000527596 927 ntBASIC2.52□□□□□ -2.01
CDX1P47902 MTCYBP33-201ENST00000575007 1130 ntBASIC2.52□□□□□ -2.01
CDX1P47902 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.52□□□□□ -2.01
CDX1P47902 AC103987.3-201ENST00000582071 292 ntBASIC2.52□□□□□ -2.01
CDX1P47902 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CDX1P47902 AC012493.2-201ENST00000595083 291 ntBASIC2.52□□□□□ -2.01
CDX1P47902 AL391646.1-201ENST00000603860 190 ntBASIC2.52□□□□□ -2.01
CDX1P47902 AP000787.2-201ENST00000604432 568 ntBASIC2.52□□□□□ -2.01
CDX1P47902 RPL23AP88-201ENST00000605759 454 ntBASIC2.52□□□□□ -2.01
CDX1P47902 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CDX1P47902 uc_338.14-201ENST00000613162 166 ntBASIC2.52□□□□□ -2.01
CDX1P47902 AC005609.4-201ENST00000625071 447 ntBASIC2.52□□□□□ -2.01
CDX1P47902 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.52□□□□□ -2.01
CDX1P47902 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CDX1P47902 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDX1P47902 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CDX1P47902 MTND5P26-201ENST00000426018 1752 ntBASIC2.51□□□□□ -2.01
CDX1P47902 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDX1P47902 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CDX1P47902 MTND5P30-201ENST00000452896 1731 ntBASIC2.51□□□□□ -2.01
CDX1P47902 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDX1P47902 SNORD14B-201ENST00000364533 90 ntBASIC2.51□□□□□ -2.01
CDX1P47902 RNU6-715P-201ENST00000365204 103 ntBASIC2.51□□□□□ -2.01
CDX1P47902 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX1P47902 RNU6-45P-201ENST00000384471 107 ntBASIC2.51□□□□□ -2.01
CDX1P47902 RNU6-748P-201ENST00000384648 107 ntBASIC2.51□□□□□ -2.01
CDX1P47902 RNU2-29P-201ENST00000410423 189 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.51□□□□□ -2.01
CDX1P47902 AC010975.2-201ENST00000427781 588 ntBASIC2.51□□□□□ -2.01
CDX1P47902 DLGAP5P1-201ENST00000430307 464 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AC092427.1-202ENST00000430569 476 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX1P47902 AC004383.1-201ENST00000438135 289 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX1P47902 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX1P47902 AL118520.1-201ENST00000450770 291 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.51□□□□□ -2.01
CDX1P47902 AL356010.1-201ENST00000456364 102 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AP001324.2-201ENST00000461163 319 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.51□□□□□ -2.01
CDX1P47902 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.51□□□□□ -2.01
CDX1P47902 MTAPP1-201ENST00000489154 819 ntBASIC2.51□□□□□ -2.01
CDX1P47902 MTND3P25-201ENST00000509243 135 ntBASIC2.51□□□□□ -2.01
CDX1P47902 MIR892C-201ENST00000516410 77 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX1P47902 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX1P47902 AC106782.4-201ENST00000568264 210 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AC008752.3-201ENST00000588113 712 ntBASIC2.51□□□□□ -2.01
CDX1P47902 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX1P47902 AL158209.2-201ENST00000619266 216 ntBASIC2.51□□□□□ -2.01
CDX1P47902 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDX1P47902 AC010329.5-201ENST00000623497 2174 ntBASIC2.51□□□□□ -2.01
CDX1P47902 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX1P47902 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.5□□□□□ -2.01
CDX1P47902 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX1P47902 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.5□□□□□ -2.01
CDX1P47902 OR4G2P-201ENST00000328113 903 ntBASIC2.5□□□□□ -2.01
CDX1P47902 MIR218-1-201ENST00000384999 110 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC068050.1-201ENST00000394891 380 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AL590004.2-201ENST00000404787 371 ntBASIC2.5□□□□□ -2.01
CDX1P47902 FTH1P15-201ENST00000406984 280 ntBASIC2.5□□□□□ -2.01
CDX1P47902 RNU6-1328P-201ENST00000410938 106 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX1P47902 MTCO3P41-201ENST00000414801 328 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX1P47902 AL353621.1-201ENST00000418219 243 ntBASIC2.5□□□□□ -2.01
CDX1P47902 MTCO2P19-201ENST00000427513 598 ntBASIC2.5□□□□□ -2.01
CDX1P47902 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX1P47902 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX1P47902 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX1P47902 AL445687.1-201ENST00000439946 251 ntBASIC2.5□□□□□ -2.01
CDX1P47902 HIGD1AP2-201ENST00000446367 280 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC027673.1-201ENST00000456245 405 ntBASIC2.5□□□□□ -2.01
CDX1P47902 GMFBP1-201ENST00000467831 427 ntBASIC2.5□□□□□ -2.01
CDX1P47902 MRPL42P6-201ENST00000486397 371 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX1P47902 RN7SL504P-201ENST00000494496 287 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC107401.1-201ENST00000503426 685 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.5□□□□□ -2.01
CDX1P47902 AC074344.1-201ENST00000512823 224 ntBASIC2.5□□□□□ -2.01
CDX1P47902 RN7SKP40-201ENST00000517211 242 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC004486.1-201ENST00000546846 233 ntBASIC2.5□□□□□ -2.01
CDX1P47902 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX1P47902 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX1P47902 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX1P47902 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.5□□□□□ -2.01
CDX1P47902 MTATP6P3-201ENST00000581686 676 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC090616.3-201ENST00000582184 217 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AL136363.2-201ENST00000604173 851 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX1P47902 AL354950.2-201ENST00000617939 290 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX1P47902 AC073534.2-201ENST00000620377 381 ntBASIC2.5□□□□□ -2.01
CDX1P47902 AC091953.5-201ENST00000622919 233 ntBASIC2.5□□□□□ -2.01
CDX1P47902 CR381653.2-201ENST00000624041 768 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms