Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 ATG3P1-201ENST00000419507 911 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 MTCO3P46-201ENST00000425787 232 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 CYCSP4-201ENST00000429682 331 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 AL360271.2-201ENST00000447710 161 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 RN7SL601P-201ENST00000471221 293 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 RPL21P99-201ENST00000480369 423 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 AC022493.1-201ENST00000492984 337 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 CCDC34P1-201ENST00000507441 517 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NKX2-1P43699 AC046134.1-201ENST00000514454 666 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 RN7SKP43-201ENST00000516173 320 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 RNU1-95P-201ENST00000516357 160 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 RNU1-128P-201ENST00000516704 160 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 RNU6-572P-201ENST00000516724 80 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 SNORA31.19-201ENST00000517079 126 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 SNORA31.26-201ENST00000517250 137 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.62□□□□□ -1.99
NKX2-1P43699 CYCSP27-201ENST00000527643 293 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 BNIP3P10-201ENST00000605360 577 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 MIR6798-201ENST00000612887 67 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 AC022306.2-201ENST00000617563 647 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 MIR6134-201ENST00000617606 109 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.62□□□□□ -1.99
NKX2-1P43699 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.62□□□□□ -1.99
NKX2-1P43699 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.62□□□□□ -1.99
NKX2-1P43699 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NKX2-1P43699 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
NKX2-1P43699 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
NKX2-1P43699 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NKX2-1P43699 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.62□□□□□ -1.99
NKX2-1P43699 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.61□□□□□ -1.99
NKX2-1P43699 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
NKX2-1P43699 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
NKX2-1P43699 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
NKX2-1P43699 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NKX2-1P43699 Y_RNA.166-201ENST00000363730 102 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 RNU6-715P-201ENST00000365204 103 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 RNU6-166P-201ENST00000384371 107 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 RNU6-45P-201ENST00000384471 107 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 MIR554-201ENST00000384874 96 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 SNORD70.1-201ENST00000391007 85 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 UBE2V1P2-201ENST00000397758 440 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.61□□□□□ -1.99
NKX2-1P43699 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 AC005300.1-201ENST00000428401 373 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 AL627311.1-201ENST00000431514 115 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 ATP5JP1-201ENST00000431631 322 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.61□□□□□ -1.99
NKX2-1P43699 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.61□□□□□ -1.99
NKX2-1P43699 NIPA2P5-201ENST00000452282 464 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 RPL21P93-201ENST00000480465 489 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 HMGB1P30-201ENST00000492455 606 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 FAM206BP-201ENST00000510179 541 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 AC010486.1-201ENST00000511793 424 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.61□□□□□ -1.99
NKX2-1P43699 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 CYCSP39-201ENST00000565821 309 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NKX2-1P43699 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX2-1P43699 AL451007.1-201ENST00000595491 289 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 AL020997.2-201ENST00000602607 184 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 AC087045.1-201ENST00000605856 382 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 AL157817.1-201ENST00000614264 790 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 AL121772.2-201ENST00000614331 297 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NKX2-1P43699 CDC27P3-201ENST00000635418 1910 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NKX2-1P43699 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
NKX2-1P43699 CASC19-280ENST00000642102 1351 ntBASIC2.61□□□□□ -1.99
NKX2-1P43699 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NKX2-1P43699 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
NKX2-1P43699 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX2-1P43699 RNA5SP124-201ENST00000362739 110 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 Y_RNA.126-201ENST00000363382 111 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 RNU4-66P-201ENST00000365199 138 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 SNORA5A-201ENST00000384111 134 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 Y_RNA.530-201ENST00000384587 101 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 RNU6-332P-201ENST00000391193 108 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 AL512633.1-201ENST00000399931 655 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 Y_RNA.623-201ENST00000411128 95 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms