Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN9P43378 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN9P43378 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN9P43378 AC134698.4-201ENST00000523451 826 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPN9P43378 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN9P43378 OR11H5P-201ENST00000554039 926 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 AC012468.1-201ENST00000604888 430 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
PTPN9P43378 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN9P43378 AC022418.1-201ENST00000624118 445 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 U2.21-201ENST00000637295 81 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPN9P43378 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN9P43378 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN9P43378 AC121333.1-201ENST00000567488 2709 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN9P43378 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN9P43378 CASC19-280ENST00000642102 1351 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 MIR412-201ENST00000362142 91 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 Y_RNA.72-201ENST00000362894 103 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 SNORA70.4-201ENST00000365509 134 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN9P43378 RNU6-45P-201ENST00000384471 107 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 SNORA16.2-201ENST00000390991 127 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 SNORD70.1-201ENST00000391007 85 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 SAR1AP2-201ENST00000392696 594 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 AL139039.1-201ENST00000401900 692 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 RNU6-1025P-201ENST00000410629 104 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN9P43378 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN9P43378 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN9P43378 MTATP6P23-201ENST00000440153 476 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 AL360271.2-201ENST00000447710 161 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 MTATP6P7-201ENST00000453315 681 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN9P43378 snoU13.22-201ENST00000459428 104 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 RNU6-1208P-201ENST00000459588 107 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN9P43378 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN9P43378 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN9P43378 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.17□□□□□ -1.9
PTPN9P43378 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN9P43378 RNU2-69P-201ENST00000516061 100 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 RNU6-703P-201ENST00000516946 107 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 AC009902.1-201ENST00000519351 183 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN9P43378 AC012493.2-201ENST00000595083 291 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 AC007938.3-201ENST00000604965 623 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 AP003400.5-201ENST00000624827 617 ntBASIC3.17□□□□□ -1.9
PTPN9P43378 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN9P43378 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN9P43378 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN9P43378 MIR22-201ENST00000362190 85 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 Y_RNA.100-201ENST00000363141 102 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 RNU6-270P-201ENST00000364131 105 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 RNU6-522P-201ENST00000364497 107 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 Y_RNA.390-201ENST00000383932 102 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 Y_RNA.480-201ENST00000384364 102 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 SNORA40C-201ENST00000391285 128 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 RNU4-26P-201ENST00000410270 107 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 RPL26P27-201ENST00000414397 437 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 AL353621.1-201ENST00000418219 243 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.16□□□□□ -1.9
PTPN9P43378 MTCO2P3-201ENST00000442543 421 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN9P43378 MTND3P10-201ENST00000450967 341 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 RNU7-167P-201ENST00000459160 62 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 HMGB1P30-201ENST00000492455 606 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 AC022493.1-201ENST00000492984 337 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN9P43378 AC009901.1-201ENST00000506703 541 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 RN7SKP43-201ENST00000516173 320 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN9P43378 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN9P43378 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN9P43378 LRRC37A5P-203ENST00000580181 585 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 MIR5583-1-201ENST00000580941 59 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN9P43378 MIR5195-201ENST00000583555 115 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 AC018638.8-201ENST00000588755 281 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 BNIP3P10-201ENST00000605360 577 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 U2.17-201ENST00000611454 95 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 RMST_4.1-201ENST00000616886 107 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PTPN9P43378 U6.42-201ENST00000618440 107 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 AC103705.1-201ENST00000619013 241 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 MIR3651-201ENST00000630427 90 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN9P43378 AC010680.1-201ENST00000590024 3590 ntBASIC3.16□□□□□ -1.9
PTPN9P43378 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPN9P43378 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN9P43378 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.9
PTPN9P43378 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms