Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNU1-72P-201ENST00000362976 153 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 Y_RNA.302-201ENST00000364997 102 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 SMIM11P1-201ENST00000369586 178 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 RNU6-925P-201ENST00000384629 104 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 AL133475.1-201ENST00000404414 305 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 RNU2-62P-201ENST00000410868 191 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.93□□□□□ -2.1
SLC1A1P43005 AL022400.1-201ENST00000423946 935 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.93□□□□□ -2.1
SLC1A1P43005 AC112771.1-201ENST00000463581 102 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 SNORA31.19-201ENST00000517079 126 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC1A1P43005 LINC00933-203ENST00000559812 219 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.93□□□□□ -2.1
SLC1A1P43005 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC1A1P43005 AL139022.2-201ENST00000606934 443 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 MTND5P42-201ENST00000637720 498 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 TEX21P-201ENST00000447107 1476 ntBASIC1.93□□□□□ -2.1
SLC1A1P43005 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SLC1A1P43005 AC106754.1-201ENST00000562632 1513 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLC1A1P43005 MIR301A-201ENST00000385261 86 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 U8.14-201ENST00000390843 143 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 RPS20P2-201ENST00000402520 389 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 MIR1302-8-201ENST00000408342 128 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC1A1P43005 RPS24P7-201ENST00000416921 246 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AC106883.1-201ENST00000418805 562 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC1A1P43005 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC1A1P43005 MTND1P20-201ENST00000430341 950 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC1A1P43005 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.92□□□□□ -2.1
SLC1A1P43005 AL591212.2-201ENST00000433923 257 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AC016691.1-201ENST00000441321 413 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.92□□□□□ -2.1
SLC1A1P43005 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC1A1P43005 FABP5P13-201ENST00000452144 328 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC1A1P43005 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC1A1P43005 BTF3P15-201ENST00000455606 336 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SLC1A1P43005 AC018437.1-201ENST00000492214 406 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AC119751.4-201ENST00000507498 357 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC1A1P43005 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC1A1P43005 AC112187.2-201ENST00000604345 283 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AC105148.1-201ENST00000604961 409 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC1A1P43005 AL365204.3-201ENST00000612448 685 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SLC1A1P43005 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AP001486.3-201ENST00000615334 372 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 uc_338.12-201ENST00000616344 181 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 MIR5739-201ENST00000619803 80 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AC138627.2-201ENST00000624202 601 ntBASIC1.92□□□□□ -2.1
SLC1A1P43005 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.92□□□□□ -2.1
SLC1A1P43005 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SLC1A1P43005 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SLC1A1P43005 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SLC1A1P43005 RNU6-511P-201ENST00000363496 107 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
SLC1A1P43005 Y_RNA.534-201ENST00000384599 112 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 MIR518D-201ENST00000385014 87 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AL353621.1-201ENST00000418219 243 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AL353706.1-201ENST00000436728 494 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.91□□□□□ -2.1
SLC1A1P43005 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC1A1P43005 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC1A1P43005 DUXAP8-207ENST00000456786 622 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC1A1P43005 TRBV12-1-201ENST00000479785 344 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 CKS1BP2-201ENST00000497342 240 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 HMGB3P17-201ENST00000504195 649 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 FAM92A1P2-202ENST00000504766 877 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 ANXA2P1-201ENST00000505539 926 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC1A1P43005 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC1A1P43005 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC1A1P43005 RNU6-1003P-201ENST00000517099 105 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 SNORA31.25-201ENST00000517242 134 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AC118273.2-201ENST00000532092 465 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.91□□□□□ -2.1
SLC1A1P43005 AC079598.5-201ENST00000547460 117 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC1A1P43005 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SLC1A1P43005 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.91□□□□□ -2.1
SLC1A1P43005 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.91□□□□□ -2.1
SLC1A1P43005 AL031281.1-201ENST00000604049 488 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AL355297.2-201ENST00000604792 129 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AC022893.3-201ENST00000607665 437 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AC092106.3-201ENST00000611308 722 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AC130324.3-201ENST00000614165 542 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 FRG1KP-201ENST00000623592 341 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 AP003400.5-201ENST00000624827 617 ntBASIC1.91□□□□□ -2.1
SLC1A1P43005 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms