Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXD13P35453 AC022493.1-201ENST00000492984 337 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AC105313.1-201ENST00000509121 353 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXD13P35453 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXD13P35453 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXD13P35453 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXD13P35453 ATP1B3P1-201ENST00000605365 821 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AC009090.3-201ENST00000616553 565 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AC009509.4-201ENST00000619202 509 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AL359740.1-201ENST00000624340 592 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AC006386.2-201ENST00000624491 75 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AC012005.1-201ENST00000624575 75 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXD13P35453 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXD13P35453 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXD13P35453 Y_RNA.51-201ENST00000362725 102 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 RNU6-461P-201ENST00000364195 107 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 Y_RNA.296-201ENST00000364930 108 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 Y_RNA.359-201ENST00000365498 102 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 SET-203ENST00000372688 801 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXD13P35453 Y_RNA.582-201ENST00000391023 95 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HOXD13P35453 AL139039.1-201ENST00000401900 692 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 SNORD88.1-201ENST00000408684 91 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 Z92545.1-201ENST00000411782 234 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXD13P35453 AC073464.1-201ENST00000429823 534 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 MTCO2P11-201ENST00000431069 680 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXD13P35453 AL596276.1-201ENST00000434465 418 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXD13P35453 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXD13P35453 AC012308.1-201ENST00000451232 178 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HOXD13P35453 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXD13P35453 AC096576.1-201ENST00000489014 359 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 RPL22P13-201ENST00000493291 347 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AC104136.1-201ENST00000512969 394 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 ACA59.2-201ENST00000517061 156 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXD13P35453 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.94□□□□□ -1.94
HOXD13P35453 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXD13P35453 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXD13P35453 AC092325.1-201ENST00000566449 554 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AC138761.3-201ENST00000579993 334 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 MIR4765-201ENST00000585007 77 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AC008945.2-201ENST00000606056 604 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AC008536.2-201ENST00000607284 349 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AC048344.4-201ENST00000619744 527 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AC011155.2-201ENST00000623202 216 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 AC092656.1-203ENST00000624134 423 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 MIR7157-201ENST00000635801 60 ntBASIC2.94□□□□□ -1.94
HOXD13P35453 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HOXD13P35453 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HOXD13P35453 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXD13P35453 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXD13P35453 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXD13P35453 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HOXD13P35453 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXD13P35453 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXD13P35453 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXD13P35453 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXD13P35453 MIR9-1-201ENST00000385198 89 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 GSTA9P-201ENST00000406231 611 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 U3.37-201ENST00000408528 213 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 RNU4-46P-201ENST00000410818 138 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 AL663109.1-201ENST00000411498 844 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXD13P35453 MTATP6P18-201ENST00000417994 673 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 MTND1P29-201ENST00000448112 647 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXD13P35453 AC108938.1-201ENST00000451204 136 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 CACYBPP2-201ENST00000453625 678 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 MTCO2P18-201ENST00000457151 658 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 GMFBP1-201ENST00000467831 427 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 AC006512.1-201ENST00000468816 291 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 MTAPP1-201ENST00000489154 819 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 FAM92A1P2-202ENST00000504766 877 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 AC117522.2-201ENST00000510049 657 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXD13P35453 GTF3AP2-201ENST00000557014 266 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 MIR3117-201ENST00000584034 78 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 AL359198.2-201ENST00000611836 194 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 AL449363.1-201ENST00000617815 186 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 AC136475.10-201ENST00000620253 385 ntBASIC2.93□□□□□ -1.94
HOXD13P35453 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXD13P35453 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXD13P35453 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXD13P35453 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXD13P35453 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXD13P35453 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXD13P35453 AL359854.1-201ENST00000614203 1594 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXD13P35453 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HOXD13P35453 AC138393.1-203ENST00000327086 343 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXD13P35453 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms