Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.97□□□□□ -2.25
SDC4P31431 ELOCP14-201ENST00000428070 331 ntBASIC0.97□□□□□ -2.25
SDC4P31431 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.97□□□□□ -2.25
SDC4P31431 ELOCP7-201ENST00000439968 331 ntBASIC0.97□□□□□ -2.25
SDC4P31431 VN1R10P-201ENST00000447106 875 ntBASIC0.97□□□□□ -2.25
SDC4P31431 AC017099.1-201ENST00000448261 1028 ntBASIC0.97□□□□□ -2.25
SDC4P31431 RPS27P1-201ENST00000450552 247 ntBASIC0.97□□□□□ -2.25
SDC4P31431 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.97□□□□□ -2.25
SDC4P31431 MTND3P4-201ENST00000453537 303 ntBASIC0.97□□□□□ -2.25
SDC4P31431 AL121594.1-201ENST00000475906 575 ntBASIC0.97□□□□□ -2.25
SDC4P31431 ARL2BPP4-201ENST00000506854 471 ntBASIC0.97□□□□□ -2.25
SDC4P31431 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.97□□□□□ -2.25
SDC4P31431 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.97□□□□□ -2.25
SDC4P31431 RNU6-902P-201ENST00000517212 91 ntBASIC0.97□□□□□ -2.25
SDC4P31431 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.97□□□□□ -2.25
SDC4P31431 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.97□□□□□ -2.25
SDC4P31431 MRPS36P5-201ENST00000551909 298 ntBASIC0.97□□□□□ -2.25
SDC4P31431 PSMA3P-201ENST00000555485 635 ntBASIC0.97□□□□□ -2.25
SDC4P31431 AL121821.2-201ENST00000556081 394 ntBASIC0.97□□□□□ -2.25
SDC4P31431 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.97□□□□□ -2.25
SDC4P31431 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.97□□□□□ -2.25
SDC4P31431 AC123912.5-201ENST00000605470 343 ntBASIC0.97□□□□□ -2.25
SDC4P31431 AL355802.3-201ENST00000607571 545 ntBASIC0.97□□□□□ -2.25
SDC4P31431 MIR8074-201ENST00000615081 81 ntBASIC0.97□□□□□ -2.25
SDC4P31431 AC006213.5-201ENST00000619673 288 ntBASIC0.97□□□□□ -2.25
SDC4P31431 AC017037.3-201ENST00000625016 472 ntBASIC0.97□□□□□ -2.25
SDC4P31431 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.97□□□□□ -2.25
SDC4P31431 AL133216.2-202ENST00000634512 349 ntBASIC0.97□□□□□ -2.25
SDC4P31431 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.97□□□□□ -2.25
SDC4P31431 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
SDC4P31431 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
SDC4P31431 AC233981.2-201ENST00000611524 1614 ntBASIC0.97□□□□□ -2.25
SDC4P31431 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.96□□□□□ -2.26
SDC4P31431 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.96□□□□□ -2.26
SDC4P31431 RNU6-839P-201ENST00000363347 108 ntBASIC0.96□□□□□ -2.26
SDC4P31431 RNU1-23P-201ENST00000363361 144 ntBASIC0.96□□□□□ -2.26
SDC4P31431 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SDC4P31431 RNU11-3P-201ENST00000391111 133 ntBASIC0.96□□□□□ -2.26
SDC4P31431 RNA5SP501-201ENST00000410990 112 ntBASIC0.96□□□□□ -2.26
SDC4P31431 MTATP6P27-201ENST00000416987 621 ntBASIC0.96□□□□□ -2.26
SDC4P31431 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.96□□□□□ -2.26
SDC4P31431 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.96□□□□□ -2.26
SDC4P31431 RPS15AP17-201ENST00000470598 390 ntBASIC0.96□□□□□ -2.26
SDC4P31431 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.96□□□□□ -2.26
SDC4P31431 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.96□□□□□ -2.26
SDC4P31431 AP003034.1-201ENST00000534621 422 ntBASIC0.96□□□□□ -2.26
SDC4P31431 AC012213.3-201ENST00000577199 777 ntBASIC0.96□□□□□ -2.26
SDC4P31431 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.96□□□□□ -2.26
SDC4P31431 AC133794.1-201ENST00000602731 914 ntBASIC0.96□□□□□ -2.26
SDC4P31431 AC002550.2-201ENST00000621246 394 ntBASIC0.96□□□□□ -2.26
SDC4P31431 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.96□□□□□ -2.26
SDC4P31431 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.96□□□□□ -2.26
SDC4P31431 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SDC4P31431 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.95□□□□□ -2.26
SDC4P31431 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
SDC4P31431 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.95□□□□□ -2.26
SDC4P31431 AC013267.1-201ENST00000458227 267 ntBASIC0.95□□□□□ -2.26
SDC4P31431 snoU13.9-201ENST00000458927 103 ntBASIC0.95□□□□□ -2.26
SDC4P31431 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.95□□□□□ -2.26
SDC4P31431 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.95□□□□□ -2.26
SDC4P31431 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.95□□□□□ -2.26
SDC4P31431 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.95□□□□□ -2.26
SDC4P31431 CYCSP27-201ENST00000527643 293 ntBASIC0.95□□□□□ -2.26
SDC4P31431 OR5B19P-201ENST00000531766 928 ntBASIC0.95□□□□□ -2.26
SDC4P31431 AC079148.1-201ENST00000565944 819 ntBASIC0.95□□□□□ -2.26
SDC4P31431 AC005668.1-201ENST00000571142 476 ntBASIC0.95□□□□□ -2.26
SDC4P31431 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.95□□□□□ -2.26
SDC4P31431 AC091946.2-201ENST00000606105 291 ntBASIC0.95□□□□□ -2.26
SDC4P31431 AL118556.2-201ENST00000614375 824 ntBASIC0.95□□□□□ -2.26
SDC4P31431 AC106730.3-201ENST00000624568 641 ntBASIC0.95□□□□□ -2.26
SDC4P31431 AC091965.5-201ENST00000624785 342 ntBASIC0.95□□□□□ -2.26
SDC4P31431 MTND5P9-201ENST00000503854 1755 ntBASIC0.95□□□□□ -2.26
SDC4P31431 AL138713.1-201ENST00000624026 2130 ntBASIC0.95□□□□□ -2.26
SDC4P31431 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SDC4P31431 MIR337-201ENST00000362281 93 ntBASIC0.94□□□□□ -2.26
SDC4P31431 SNORD114-27-201ENST00000363766 70 ntBASIC0.94□□□□□ -2.26
SDC4P31431 Y_RNA.245-201ENST00000364493 95 ntBASIC0.94□□□□□ -2.26
SDC4P31431 RNU6-439P-201ENST00000384188 106 ntBASIC0.94□□□□□ -2.26
SDC4P31431 Y_RNA.548-201ENST00000384656 105 ntBASIC0.94□□□□□ -2.26
SDC4P31431 MTCO3P1-205ENST00000422088 832 ntBASIC0.94□□□□□ -2.26
SDC4P31431 MTND1P28-201ENST00000435623 950 ntBASIC0.94□□□□□ -2.26
SDC4P31431 DYNLT3P2-201ENST00000442517 295 ntBASIC0.94□□□□□ -2.26
SDC4P31431 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.94□□□□□ -2.26
SDC4P31431 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.94□□□□□ -2.26
SDC4P31431 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.94□□□□□ -2.26
SDC4P31431 RNU6-667P-201ENST00000517186 102 ntBASIC0.94□□□□□ -2.26
SDC4P31431 MTCO2P15-201ENST00000532655 656 ntBASIC0.94□□□□□ -2.26
SDC4P31431 AC125611.1-201ENST00000549563 229 ntBASIC0.94□□□□□ -2.26
SDC4P31431 AC233266.2-201ENST00000567067 528 ntBASIC0.94□□□□□ -2.26
SDC4P31431 CYP2C61P-201ENST00000604072 290 ntBASIC0.94□□□□□ -2.26
SDC4P31431 AC090517.3-201ENST00000625170 141 ntBASIC0.94□□□□□ -2.26
SDC4P31431 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SDC4P31431 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
SDC4P31431 RNU6-796P-201ENST00000391086 107 ntBASIC0.93□□□□□ -2.26
SDC4P31431 AL133264.1-201ENST00000407157 562 ntBASIC0.93□□□□□ -2.26
SDC4P31431 AL135790.2-201ENST00000437701 267 ntBASIC0.93□□□□□ -2.26
SDC4P31431 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.93□□□□□ -2.26
SDC4P31431 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.93□□□□□ -2.26
SDC4P31431 RNU6-775P-201ENST00000459318 96 ntBASIC0.93□□□□□ -2.26
SDC4P31431 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms