Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CD40P25942 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD40P25942 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CD40P25942 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CD40P25942 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
CD40P25942 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 Z82217.1-201ENST00000625157 8149 ntBASIC3.6□□□□□ -1.83
CD40P25942 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.6□□□□□ -1.83
CD40P25942 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.6□□□□□ -1.83
CD40P25942 AC005592.1-201ENST00000566527 1640 ntBASIC3.6□□□□□ -1.83
CD40P25942 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.6□□□□□ -1.83
CD40P25942 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD40P25942 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.6□□□□□ -1.83
CD40P25942 MIR372-201ENST00000362225 67 ntBASIC3.6□□□□□ -1.83
CD40P25942 SNORD56.1-201ENST00000362913 68 ntBASIC3.6□□□□□ -1.83
CD40P25942 Y_RNA.80-201ENST00000362996 102 ntBASIC3.6□□□□□ -1.83
CD40P25942 Y_RNA.485-201ENST00000384395 102 ntBASIC3.6□□□□□ -1.83
CD40P25942 RNA5SP372-201ENST00000390836 115 ntBASIC3.6□□□□□ -1.83
CD40P25942 BTF3L4P2-201ENST00000392798 346 ntBASIC3.6□□□□□ -1.83
CD40P25942 AL138885.1-201ENST00000405921 675 ntBASIC3.6□□□□□ -1.83
CD40P25942 RNU6-985P-201ENST00000410182 104 ntBASIC3.6□□□□□ -1.83
CD40P25942 RNU2-23P-201ENST00000410545 195 ntBASIC3.6□□□□□ -1.83
CD40P25942 RNA5SP146-201ENST00000410743 123 ntBASIC3.6□□□□□ -1.83
CD40P25942 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.6□□□□□ -1.83
CD40P25942 MTCYBP10-201ENST00000424905 650 ntBASIC3.6□□□□□ -1.83
CD40P25942 AL117339.2-201ENST00000430475 180 ntBASIC3.6□□□□□ -1.83
CD40P25942 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.6□□□□□ -1.83
CD40P25942 MTND3P2-201ENST00000438452 342 ntBASIC3.6□□□□□ -1.83
CD40P25942 RPS3AP46-201ENST00000448352 682 ntBASIC3.6□□□□□ -1.83
CD40P25942 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 AC133473.1-201ENST00000455173 299 ntBASIC3.6□□□□□ -1.83
CD40P25942 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.6□□□□□ -1.83
CD40P25942 RN7SL817P-201ENST00000480777 288 ntBASIC3.6□□□□□ -1.83
CD40P25942 RNU4-77P-201ENST00000516692 156 ntBASIC3.6□□□□□ -1.83
CD40P25942 MIR5696-201ENST00000578474 85 ntBASIC3.6□□□□□ -1.83
CD40P25942 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.6□□□□□ -1.83
CD40P25942 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.6□□□□□ -1.83
CD40P25942 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.6□□□□□ -1.83
CD40P25942 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CD40P25942 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CD40P25942 AL353746.1-201ENST00000566293 6881 ntBASIC3.6□□□□□ -1.83
CD40P25942 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CD40P25942 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CD40P25942 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.59□□□□□ -1.83
CD40P25942 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CD40P25942 MTND5P16-201ENST00000460269 1703 ntBASIC3.59□□□□□ -1.83
CD40P25942 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CD40P25942 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
CD40P25942 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
CD40P25942 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CD40P25942 RNU1-15P-201ENST00000353977 144 ntBASIC3.59□□□□□ -1.83
CD40P25942 Y_RNA.39-201ENST00000362620 98 ntBASIC3.59□□□□□ -1.83
CD40P25942 RNU6-595P-201ENST00000363944 107 ntBASIC3.59□□□□□ -1.83
CD40P25942 AP000275.1-201ENST00000411943 390 ntBASIC3.59□□□□□ -1.83
CD40P25942 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.59□□□□□ -1.83
CD40P25942 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.59□□□□□ -1.83
CD40P25942 AC079354.2-201ENST00000453523 154 ntBASIC3.59□□□□□ -1.83
CD40P25942 AL353752.1-201ENST00000454946 260 ntBASIC3.59□□□□□ -1.83
CD40P25942 HMGN2P7-201ENST00000456186 273 ntBASIC3.59□□□□□ -1.83
CD40P25942 RPL7AP28-201ENST00000464513 571 ntBASIC3.59□□□□□ -1.83
CD40P25942 AC021146.2-201ENST00000504736 556 ntBASIC3.59□□□□□ -1.83
CD40P25942 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.59□□□□□ -1.83
CD40P25942 NDUFB4P9-201ENST00000511646 388 ntBASIC3.59□□□□□ -1.83
CD40P25942 AC026402.1-201ENST00000513642 170 ntBASIC3.59□□□□□ -1.83
CD40P25942 RNU6-764P-201ENST00000516396 105 ntBASIC3.59□□□□□ -1.83
CD40P25942 GNAI2P1-201ENST00000541815 315 ntBASIC3.59□□□□□ -1.83
CD40P25942 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.59□□□□□ -1.83
CD40P25942 AC006199.1-201ENST00000548728 219 ntBASIC3.59□□□□□ -1.83
CD40P25942 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.59□□□□□ -1.83
CD40P25942 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.59□□□□□ -1.83
CD40P25942 AC004584.2-201ENST00000570407 410 ntBASIC3.59□□□□□ -1.83
CD40P25942 MIR1244-1-201ENST00000612829 85 ntBASIC3.59□□□□□ -1.83
CD40P25942 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.59□□□□□ -1.83
CD40P25942 AC008121.3-201ENST00000618726 433 ntBASIC3.59□□□□□ -1.83
CD40P25942 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.59□□□□□ -1.83
CD40P25942 AL606534.2-204ENST00000635008 178 ntBASIC3.59□□□□□ -1.83
CD40P25942 MIR1244-3-201ENST00000635744 85 ntBASIC3.59□□□□□ -1.83
CD40P25942 MIR3199-2-201ENST00000636243 86 ntBASIC3.59□□□□□ -1.83
CD40P25942 MIR1244-2-201ENST00000636449 85 ntBASIC3.59□□□□□ -1.83
CD40P25942 MIR1244-4-202ENST00000636813 85 ntBASIC3.59□□□□□ -1.83
CD40P25942 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CD40P25942 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CD40P25942 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CD40P25942 RLIMP1-201ENST00000339626 1680 ntBASIC3.59□□□□□ -1.84
CD40P25942 AC009541.1-201ENST00000438279 2662 ntBASIC3.58□□□□□ -1.84
CD40P25942 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.58□□□□□ -1.84
CD40P25942 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD40P25942 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
CD40P25942 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.58□□□□□ -1.84
CD40P25942 AC091812.1-201ENST00000432235 1948 ntBASIC3.58□□□□□ -1.84
CD40P25942 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.58□□□□□ -1.84
CD40P25942 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD40P25942 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms