Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.22□□□□□ -2.21
RPS4Y1P22090 GTF2IP3-201ENST00000433887 494 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 AL353706.1-201ENST00000436728 494 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 MTND2P29-201ENST00000438595 412 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 RPL23AP76-201ENST00000441860 458 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.22□□□□□ -2.21
RPS4Y1P22090 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.22□□□□□ -2.21
RPS4Y1P22090 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 AC104563.1-201ENST00000476147 376 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RPS4Y1P22090 RNU6-390P-201ENST00000516259 103 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 OR8K2P-201ENST00000524645 927 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 AP003033.1-201ENST00000527244 415 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 NDUFA5P6-201ENST00000542110 379 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 AC022254.1-201ENST00000567857 235 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.22□□□□□ -2.21
RPS4Y1P22090 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.22□□□□□ -2.21
RPS4Y1P22090 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.22□□□□□ -2.21
RPS4Y1P22090 AC016925.2-201ENST00000605108 242 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 AC068880.4-201ENST00000623082 495 ntBASIC1.22□□□□□ -2.21
RPS4Y1P22090 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPS4Y1P22090 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
RPS4Y1P22090 ZNF209P-201ENST00000593450 2304 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RPS4Y1P22090 RNU1-23P-201ENST00000363361 144 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 Y_RNA.140-201ENST00000363474 103 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 RNU6-188P-201ENST00000364207 107 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 RNU6-512P-201ENST00000364438 103 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 MIR1302-8-201ENST00000408342 128 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC078974.1-201ENST00000411597 223 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC127391.1-201ENST00000411737 98 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 OR51A5P-201ENST00000415429 942 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 AL137159.1-201ENST00000452808 512 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 AL441985.1-201ENST00000457727 251 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC112771.1-201ENST00000463581 102 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC093809.1-201ENST00000509155 340 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 FAM206BP-201ENST00000510179 541 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 RNU6-237P-201ENST00000515985 71 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 RNU6-1183P-201ENST00000517054 60 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 DEFB131D-201ENST00000526803 184 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 MIR3198-2-201ENST00000577868 80 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 NDUFA8P1-201ENST00000605525 367 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC018638.7-201ENST00000605836 1114 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC092953.2-201ENST00000608000 699 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 MIR6134-201ENST00000617606 109 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC006338.1-201ENST00000618453 749 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC091304.6-201ENST00000619761 202 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC231657.1-201ENST00000624313 397 ntBASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.21□□□□□ -2.22
RPS4Y1P22090 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 RNU6-661P-201ENST00000362409 107 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 snoZ40.1-201ENST00000364540 72 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 RNU6-744P-201ENST00000365557 107 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 RNU6-1316P-201ENST00000384242 108 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 RPL21P24-201ENST00000413752 448 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 USP9YP24-201ENST00000434374 697 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 RPS15AP9-201ENST00000439856 381 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 BTBD7P2-201ENST00000441962 620 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 RNU6-678P-201ENST00000516832 109 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 MIR3124-201ENST00000582636 67 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS4Y1P22090 AL512598.1-201ENST00000610158 273 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 AC013470.4-201ENST00000619978 986 ntBASIC1.2□□□□□ -2.22
RPS4Y1P22090 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RPS4Y1P22090 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.19□□□□□ -2.22
RPS4Y1P22090 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.19□□□□□ -2.22
RPS4Y1P22090 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RPS4Y1P22090 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms