Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC095031.1-201ENST00000623685 672 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AC068137.3-201ENST00000639191 341 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AC073869.6-201ENST00000640656 341 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
COL5A1P20908 MTND4P16-201ENST00000466108 1367 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL5A1P20908 RNY4P24-201ENST00000362735 96 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 RNU6-799P-201ENST00000363567 107 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 RNU6-343P-201ENST00000364709 104 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 Y_RNA.359-201ENST00000365498 102 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 RNU4-52P-201ENST00000384209 138 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 DHFRP6-201ENST00000401776 268 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AL590002.1-201ENST00000406554 418 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 BX682237.1-201ENST00000415016 335 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 POLR2J4-204ENST00000418424 324 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.7□□□□□ -2.14
COL5A1P20908 PIGFP2-201ENST00000421400 651 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC007742.1-201ENST00000425789 329 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AL358075.3-201ENST00000426289 226 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC104651.1-201ENST00000427559 735 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 MTND1P28-201ENST00000435623 950 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 ELOCP26-201ENST00000436067 329 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.7□□□□□ -2.14
COL5A1P20908 AL031659.1-201ENST00000447075 539 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 AL590365.1-201ENST00000450788 243 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 ATP5J2P3-201ENST00000451550 258 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 HMGN2P13-201ENST00000476476 274 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.7□□□□□ -2.14
COL5A1P20908 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.7□□□□□ -2.14
COL5A1P20908 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.7□□□□□ -2.14
COL5A1P20908 AC016065.2-201ENST00000514530 444 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 RNU6-150P-201ENST00000516237 95 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.7□□□□□ -2.14
COL5A1P20908 AP003392.2-201ENST00000527269 208 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC013828.2-201ENST00000532487 235 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 CBX3P4-201ENST00000538909 354 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 RPL21P5-201ENST00000554662 472 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 MTCO3P24-201ENST00000572729 782 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 SNORD84-203ENST00000584275 78 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.7□□□□□ -2.14
COL5A1P20908 SEPT7P9-203ENST00000604116 343 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AL009028.1-201ENST00000604895 802 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 RNU6-87P-201ENST00000607561 108 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 MIR8081-201ENST00000611533 95 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC138649.3-201ENST00000622154 254 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.7□□□□□ -2.14
COL5A1P20908 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL5A1P20908 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
COL5A1P20908 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
COL5A1P20908 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL5A1P20908 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
COL5A1P20908 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
COL5A1P20908 AL391987.6-201ENST00000305671 199 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 RNU6-1207P-201ENST00000384343 107 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 U8.14-201ENST00000390843 143 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 MIR1250-201ENST00000408098 113 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC078974.1-201ENST00000411597 223 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 HMGN1P14-201ENST00000412459 517 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 ELOCP17-201ENST00000414751 326 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC099677.1-201ENST00000420575 175 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 OFD1P18Y-201ENST00000420889 959 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 RPS3AP44-201ENST00000425466 790 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AL589872.1-201ENST00000426602 288 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.7□□□□□ -2.14
COL5A1P20908 PSMA6P3-201ENST00000428242 164 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.7□□□□□ -2.14
COL5A1P20908 RPL35AP22-201ENST00000436855 335 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 MTATP6P30-201ENST00000443540 664 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 ELOCP30-201ENST00000447108 299 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 RPL12P25-201ENST00000455592 494 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.7□□□□□ -2.14
COL5A1P20908 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 AC034222.1-201ENST00000494052 532 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC135721.1-201ENST00000497954 479 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC107401.1-201ENST00000503426 685 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 SNORD59.2-201ENST00000516873 68 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 RNU6-201P-201ENST00000517100 61 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC107934.1-201ENST00000522215 217 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A1P20908 AC121758.2-201ENST00000553271 193 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AP003465.2-201ENST00000602571 373 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 YWHAQP7-201ENST00000603536 658 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 OR10AB1P-201ENST00000609613 938 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 AC008498.1-201ENST00000613012 531 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 MIR6863-201ENST00000636112 90 ntBASIC1.7□□□□□ -2.14
COL5A1P20908 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL5A1P20908 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL5A1P20908 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL5A1P20908 AL136164.4-201ENST00000625013 2135 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A1P20908 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL5A1P20908 Y_RNA.159-201ENST00000363674 87 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms