Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC124312.5-201ENST00000604451 268 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AP000942.4-201ENST00000604811 241 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AC087588.2-201ENST00000617667 426 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AC091903.1-201ENST00000624322 454 ntBASIC3.96□□□□□ -1.78
ATF4P18848 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATF4P18848 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATF4P18848 FAM35DP-201ENST00000323387 2712 ntBASIC3.96□□□□□ -1.78
ATF4P18848 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
ATF4P18848 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATF4P18848 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATF4P18848 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.96□□□□□ -1.78
ATF4P18848 AP000560.1-201ENST00000624150 1937 ntBASIC3.95□□□□□ -1.78
ATF4P18848 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF4P18848 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.95□□□□□ -1.78
ATF4P18848 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATF4P18848 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF4P18848 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ATF4P18848 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF4P18848 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF4P18848 Y_RNA.126-201ENST00000363382 111 ntBASIC3.95□□□□□ -1.78
ATF4P18848 RNA5SP90-201ENST00000364801 99 ntBASIC3.95□□□□□ -1.78
ATF4P18848 Y_RNA.380-201ENST00000365663 111 ntBASIC3.95□□□□□ -1.78
ATF4P18848 RNU6-171P-201ENST00000384354 107 ntBASIC3.95□□□□□ -1.78
ATF4P18848 SNORA67-201ENST00000384423 137 ntBASIC3.95□□□□□ -1.78
ATF4P18848 MTHFD2P2-201ENST00000407725 247 ntBASIC3.95□□□□□ -1.78
ATF4P18848 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.95□□□□□ -1.78
ATF4P18848 DDX39BP1-205ENST00000422507 192 ntBASIC3.95□□□□□ -1.78
ATF4P18848 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.95□□□□□ -1.78
ATF4P18848 AC009238.2-201ENST00000431026 355 ntBASIC3.95□□□□□ -1.78
ATF4P18848 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.95□□□□□ -1.78
ATF4P18848 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.95□□□□□ -1.78
ATF4P18848 CEACAMP7-201ENST00000444105 496 ntBASIC3.95□□□□□ -1.78
ATF4P18848 MTCO3P8-201ENST00000453691 755 ntBASIC3.95□□□□□ -1.78
ATF4P18848 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.95□□□□□ -1.78
ATF4P18848 SNRPCP2-201ENST00000504370 475 ntBASIC3.95□□□□□ -1.78
ATF4P18848 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
ATF4P18848 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.95□□□□□ -1.78
ATF4P18848 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.95□□□□□ -1.78
ATF4P18848 AC021231.3-201ENST00000558497 370 ntBASIC3.95□□□□□ -1.78
ATF4P18848 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.95□□□□□ -1.78
ATF4P18848 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.95□□□□□ -1.78
ATF4P18848 Z98751.3-201ENST00000604447 521 ntBASIC3.95□□□□□ -1.78
ATF4P18848 RPL23AP88-201ENST00000605759 454 ntBASIC3.95□□□□□ -1.78
ATF4P18848 HMGB1P50-201ENST00000605814 607 ntBASIC3.95□□□□□ -1.78
ATF4P18848 AP005432.2-201ENST00000608162 586 ntBASIC3.95□□□□□ -1.78
ATF4P18848 RMST_6.1-201ENST00000611980 203 ntBASIC3.95□□□□□ -1.78
ATF4P18848 MAPK10-253ENST00000641010 4072 ntBASIC3.95□□□□□ -1.78
ATF4P18848 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF4P18848 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATF4P18848 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
ATF4P18848 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATF4P18848 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.94□□□□□ -1.78
ATF4P18848 ZNF826P-207ENST00000622273 1910 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.94□□□□□ -1.78
ATF4P18848 HSPA8P1-201ENST00000425843 1833 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RNA5SP305-201ENST00000362665 119 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RNU6-1159P-201ENST00000362933 107 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RNU6-1309P-201ENST00000363305 108 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RN7SKP113-201ENST00000363891 295 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RNA5SP139-201ENST00000364340 117 ntBASIC3.94□□□□□ -1.78
ATF4P18848 U3.13-201ENST00000364804 214 ntBASIC3.94□□□□□ -1.78
ATF4P18848 SNORA29-201ENST00000384183 140 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RNU6-1105P-201ENST00000384774 107 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RNU1-77P-201ENST00000390868 162 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RNU6-823P-201ENST00000391042 103 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RNU1-101P-201ENST00000391171 127 ntBASIC3.94□□□□□ -1.78
ATF4P18848 Y_RNA.592-201ENST00000410274 109 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AC108075.1-201ENST00000424692 529 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AL358176.2-201ENST00000425769 204 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RPL21P40-201ENST00000428586 483 ntBASIC3.94□□□□□ -1.78
ATF4P18848 COX6CP13-201ENST00000428703 226 ntBASIC3.94□□□□□ -1.78
ATF4P18848 HLA-N-201ENST00000437516 135 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.94□□□□□ -1.78
ATF4P18848 AC093852.1-201ENST00000503587 266 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.94□□□□□ -1.78
ATF4P18848 OR7H2P-201ENST00000513483 306 ntBASIC3.94□□□□□ -1.78
ATF4P18848 GNRHR2P1-201ENST00000555315 631 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AL117187.1-201ENST00000555482 181 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RPL10P14-201ENST00000565265 298 ntBASIC3.94□□□□□ -1.78
ATF4P18848 MIR4644-201ENST00000579929 84 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AC113195.1-201ENST00000579952 141 ntBASIC3.94□□□□□ -1.78
ATF4P18848 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ATF4P18848 RPS15AP11-201ENST00000594193 385 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RPS29P30-201ENST00000600975 111 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AL359198.2-201ENST00000611836 194 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AC064801.1-201ENST00000612025 407 ntBASIC3.94□□□□□ -1.78
ATF4P18848 RPSAP73-201ENST00000614820 330 ntBASIC3.94□□□□□ -1.78
ATF4P18848 XIST_intron.1-201ENST00000619444 68 ntBASIC3.94□□□□□ -1.78
ATF4P18848 AC138305.3-201ENST00000624988 240 ntBASIC3.94□□□□□ -1.78
ATF4P18848 U6.98-201ENST00000637157 84 ntBASIC3.94□□□□□ -1.78
ATF4P18848 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATF4P18848 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATF4P18848 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ATF4P18848 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATF4P18848 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ATF4P18848 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATF4P18848 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.93□□□□□ -1.78
ATF4P18848 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATF4P18848 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATF4P18848 U3.2-201ENST00000362981 210 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms