Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AL391813.1-201ENST00000603098 260 ntBASIC2.27□□□□□ -2.05
SDC1P18827 AL022154.1-201ENST00000604698 785 ntBASIC2.27□□□□□ -2.05
SDC1P18827 AC006566.1-201ENST00000608943 513 ntBASIC2.27□□□□□ -2.05
SDC1P18827 AC011890.2-201ENST00000613393 294 ntBASIC2.27□□□□□ -2.05
SDC1P18827 AC010678.1-201ENST00000614118 713 ntBASIC2.27□□□□□ -2.05
SDC1P18827 AC024940.5-201ENST00000622889 474 ntBASIC2.27□□□□□ -2.05
SDC1P18827 AL157786.1-207ENST00000627771 695 ntBASIC2.27□□□□□ -2.05
SDC1P18827 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SDC1P18827 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SDC1P18827 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
SDC1P18827 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SDC1P18827 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SDC1P18827 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.27□□□□□ -2.05
SDC1P18827 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.27□□□□□ -2.05
SDC1P18827 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SDC1P18827 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SDC1P18827 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SDC1P18827 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SDC1P18827 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.26□□□□□ -2.05
SDC1P18827 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SDC1P18827 CKAP2P1-201ENST00000555477 2049 ntBASIC2.26□□□□□ -2.05
SDC1P18827 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SDC1P18827 SNORD116-9-201ENST00000384000 95 ntBASIC2.26□□□□□ -2.05
SDC1P18827 RNU6-74P-201ENST00000384235 107 ntBASIC2.26□□□□□ -2.05
SDC1P18827 SNORD116-3-201ENST00000384287 95 ntBASIC2.26□□□□□ -2.05
SDC1P18827 RNU6-166P-201ENST00000384371 107 ntBASIC2.26□□□□□ -2.05
SDC1P18827 SNORD116-7-201ENST00000384404 95 ntBASIC2.26□□□□□ -2.05
SDC1P18827 SNORD116-5-201ENST00000384462 95 ntBASIC2.26□□□□□ -2.05
SDC1P18827 RNU6-1328P-201ENST00000410938 106 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AL160275.3-201ENST00000423876 471 ntBASIC2.26□□□□□ -2.05
SDC1P18827 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.26□□□□□ -2.05
SDC1P18827 AC007560.1-201ENST00000426912 237 ntBASIC2.26□□□□□ -2.05
SDC1P18827 SUMO1P4-201ENST00000429430 302 ntBASIC2.26□□□□□ -2.05
SDC1P18827 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.26□□□□□ -2.05
SDC1P18827 AL161651.1-201ENST00000440882 223 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AL360221.1-201ENST00000445989 335 ntBASIC2.26□□□□□ -2.05
SDC1P18827 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.26□□□□□ -2.05
SDC1P18827 AC126389.1-201ENST00000477436 290 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AC022493.1-201ENST00000492984 337 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
SDC1P18827 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SDC1P18827 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.26□□□□□ -2.05
SDC1P18827 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.26□□□□□ -2.05
SDC1P18827 SNORA31.6-201ENST00000516241 130 ntBASIC2.26□□□□□ -2.05
SDC1P18827 RNU6-430P-201ENST00000517078 107 ntBASIC2.26□□□□□ -2.05
SDC1P18827 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.26□□□□□ -2.05
SDC1P18827 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.26□□□□□ -2.05
SDC1P18827 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.26□□□□□ -2.05
SDC1P18827 MIR4782-201ENST00000577987 79 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
SDC1P18827 AC098848.2-201ENST00000588023 330 ntBASIC2.26□□□□□ -2.05
SDC1P18827 DEFB131E-202ENST00000602581 683 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AC091152.3-201ENST00000604227 325 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AC007621.1-201ENST00000604544 437 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AC103810.6-201ENST00000606708 136 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AC109347.2-201ENST00000610220 349 ntBASIC2.26□□□□□ -2.05
SDC1P18827 MIR6817-201ENST00000615588 66 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AC099842.1-201ENST00000619919 596 ntBASIC2.26□□□□□ -2.05
SDC1P18827 AC138649.3-201ENST00000622154 254 ntBASIC2.26□□□□□ -2.05
SDC1P18827 MIR7515-201ENST00000637837 67 ntBASIC2.26□□□□□ -2.05
SDC1P18827 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SDC1P18827 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SDC1P18827 AL390237.1-201ENST00000404226 1415 ntBASIC2.25□□□□□ -2.05
SDC1P18827 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SDC1P18827 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SDC1P18827 CDC27P3-201ENST00000635418 1910 ntBASIC2.25□□□□□ -2.05
SDC1P18827 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SDC1P18827 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.25□□□□□ -2.05
SDC1P18827 SNORD3E-201ENST00000362899 217 ntBASIC2.25□□□□□ -2.05
SDC1P18827 RNU6-179P-201ENST00000363350 107 ntBASIC2.25□□□□□ -2.05
SDC1P18827 RNA5SP68-201ENST00000363885 119 ntBASIC2.25□□□□□ -2.05
SDC1P18827 RNU6-461P-201ENST00000364195 107 ntBASIC2.25□□□□□ -2.05
SDC1P18827 SNORD114-30-201ENST00000364448 72 ntBASIC2.25□□□□□ -2.05
SDC1P18827 RNU6-108P-201ENST00000365558 107 ntBASIC2.25□□□□□ -2.05
SDC1P18827 RNU6-395P-201ENST00000365662 106 ntBASIC2.25□□□□□ -2.05
SDC1P18827 MIR1-2-201ENST00000384961 85 ntBASIC2.25□□□□□ -2.05
SDC1P18827 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC1P18827 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC1P18827 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC1P18827 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.25□□□□□ -2.05
SDC1P18827 AC133104.1-201ENST00000429100 218 ntBASIC2.25□□□□□ -2.05
SDC1P18827 AC092427.1-202ENST00000430569 476 ntBASIC2.25□□□□□ -2.05
SDC1P18827 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.25□□□□□ -2.05
SDC1P18827 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC1P18827 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.25□□□□□ -2.05
SDC1P18827 AL078601.1-201ENST00000444542 271 ntBASIC2.25□□□□□ -2.05
SDC1P18827 OSTCP8-201ENST00000445117 448 ntBASIC2.25□□□□□ -2.05
SDC1P18827 AC079781.2-201ENST00000446424 169 ntBASIC2.25□□□□□ -2.05
SDC1P18827 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC1P18827 AC092001.1-201ENST00000453012 261 ntBASIC2.25□□□□□ -2.05
SDC1P18827 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.25□□□□□ -2.05
SDC1P18827 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC1P18827 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SDC1P18827 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC1P18827 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.25□□□□□ -2.05
SDC1P18827 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.25□□□□□ -2.05
SDC1P18827 FAM92A1P2-202ENST00000504766 877 ntBASIC2.25□□□□□ -2.05
SDC1P18827 RNU5F-8P-201ENST00000515941 111 ntBASIC2.25□□□□□ -2.05
SDC1P18827 RNU6-581P-201ENST00000516214 105 ntBASIC2.25□□□□□ -2.05
SDC1P18827 RNA5SP148-201ENST00000516527 94 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms