Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.05□□□□□ -2.08
NCK1P16333 AC009963.1-201ENST00000417265 157 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.05□□□□□ -2.08
NCK1P16333 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.05□□□□□ -2.08
NCK1P16333 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.05□□□□□ -2.08
NCK1P16333 UBE2D3P1-201ENST00000436669 444 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AL512286.1-201ENST00000439244 400 ntBASIC2.05□□□□□ -2.08
NCK1P16333 PGBD4P3-201ENST00000440731 581 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AL606517.1-201ENST00000446914 387 ntBASIC2.05□□□□□ -2.08
NCK1P16333 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.05□□□□□ -2.08
NCK1P16333 AL109933.2-201ENST00000452651 260 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AC109486.1-201ENST00000486833 374 ntBASIC2.05□□□□□ -2.08
NCK1P16333 RN7SL636P-201ENST00000497504 294 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.05□□□□□ -2.08
NCK1P16333 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.05□□□□□ -2.08
NCK1P16333 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.05□□□□□ -2.08
NCK1P16333 ELOCP32-201ENST00000548625 324 ntBASIC2.05□□□□□ -2.08
NCK1P16333 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NCK1P16333 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.05□□□□□ -2.08
NCK1P16333 MIR15A-201ENST00000607334 83 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AC138749.5-201ENST00000611461 208 ntBASIC2.05□□□□□ -2.08
NCK1P16333 MIR6840-201ENST00000611937 71 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AL359547.2-201ENST00000615810 418 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AC116165.2-201ENST00000616705 206 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AP003485.2-201ENST00000623636 610 ntBASIC2.05□□□□□ -2.08
NCK1P16333 AC012640.5-201ENST00000623897 319 ntBASIC2.05□□□□□ -2.08
NCK1P16333 RNU1-72P-201ENST00000362976 153 ntBASIC2.04□□□□□ -2.08
NCK1P16333 RNU6-533P-201ENST00000384144 107 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.04□□□□□ -2.08
NCK1P16333 AC107081.1-201ENST00000414975 361 ntBASIC2.04□□□□□ -2.08
NCK1P16333 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.04□□□□□ -2.08
NCK1P16333 AL365184.2-201ENST00000431139 435 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.04□□□□□ -2.08
NCK1P16333 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.04□□□□□ -2.08
NCK1P16333 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.04□□□□□ -2.08
NCK1P16333 AC068781.1-201ENST00000488231 618 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AC117522.2-201ENST00000510049 657 ntBASIC2.04□□□□□ -2.08
NCK1P16333 RPL23AP94-201ENST00000512518 302 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.04□□□□□ -2.08
NCK1P16333 PSMA3P-201ENST00000555485 635 ntBASIC2.04□□□□□ -2.08
NCK1P16333 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.04□□□□□ -2.08
NCK1P16333 RPS3AP23-202ENST00000574601 686 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.04□□□□□ -2.08
NCK1P16333 AC078899.2-201ENST00000595282 212 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.04□□□□□ -2.08
NCK1P16333 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NCK1P16333 AL031775.1-201ENST00000607014 887 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AL355816.2-201ENST00000610049 647 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AC130324.3-201ENST00000614165 542 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AC104010.1-201ENST00000616889 150 ntBASIC2.04□□□□□ -2.08
NCK1P16333 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.04□□□□□ -2.08
NCK1P16333 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NCK1P16333 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NCK1P16333 MIR412-201ENST00000362142 91 ntBASIC2.03□□□□□ -2.08
NCK1P16333 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
NCK1P16333 CIR1P3-201ENST00000405137 479 ntBASIC2.03□□□□□ -2.08
NCK1P16333 RNA5SP184-201ENST00000411071 108 ntBASIC2.03□□□□□ -2.08
NCK1P16333 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.03□□□□□ -2.08
NCK1P16333 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NCK1P16333 MORF4L1P6-201ENST00000418771 268 ntBASIC2.03□□□□□ -2.08
NCK1P16333 AC005005.2-201ENST00000420779 380 ntBASIC2.03□□□□□ -2.08
NCK1P16333 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.03□□□□□ -2.08
NCK1P16333 NUP35P1-201ENST00000422734 947 ntBASIC2.03□□□□□ -2.08
NCK1P16333 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.03□□□□□ -2.08
NCK1P16333 AL161788.1-201ENST00000441805 169 ntBASIC2.03□□□□□ -2.08
NCK1P16333 USP9YP15-201ENST00000442391 422 ntBASIC2.03□□□□□ -2.08
NCK1P16333 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.03□□□□□ -2.08
NCK1P16333 MTND4P2-201ENST00000507767 1203 ntBASIC2.03□□□□□ -2.08
NCK1P16333 SMURF2P1-201ENST00000514992 481 ntBASIC2.03□□□□□ -2.08
NCK1P16333 RNA5SP356-201ENST00000515972 94 ntBASIC2.03□□□□□ -2.08
NCK1P16333 RNA5SP24-201ENST00000516478 95 ntBASIC2.03□□□□□ -2.08
NCK1P16333 RNA5SP337-201ENST00000517007 109 ntBASIC2.03□□□□□ -2.08
NCK1P16333 SNORA48.11-201ENST00000517015 89 ntBASIC2.03□□□□□ -2.08
NCK1P16333 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
NCK1P16333 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.03□□□□□ -2.08
NCK1P16333 MIR4435-1-201ENST00000582552 80 ntBASIC2.03□□□□□ -2.08
NCK1P16333 AC027449.1-201ENST00000608890 407 ntBASIC2.03□□□□□ -2.08
NCK1P16333 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.03□□□□□ -2.08
NCK1P16333 AC009878.1-201ENST00000621819 340 ntBASIC2.03□□□□□ -2.08
NCK1P16333 AC092656.1-203ENST00000624134 423 ntBASIC2.03□□□□□ -2.08
NCK1P16333 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.03□□□□□ -2.08
NCK1P16333 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.03□□□□□ -2.08
NCK1P16333 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.09
NCK1P16333 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.03□□□□□ -2.09
NCK1P16333 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
NCK1P16333 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
NCK1P16333 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.02□□□□□ -2.09
NCK1P16333 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
NCK1P16333 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NCK1P16333 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NCK1P16333 RNU6-1010P-201ENST00000362757 107 ntBASIC2.02□□□□□ -2.09
NCK1P16333 RNU4-1-201ENST00000363925 141 ntBASIC2.02□□□□□ -2.09
NCK1P16333 SNORA72.3-201ENST00000365074 132 ntBASIC2.02□□□□□ -2.09
NCK1P16333 RNU6-301P-201ENST00000384277 107 ntBASIC2.02□□□□□ -2.09
NCK1P16333 AL355497.1-201ENST00000406262 551 ntBASIC2.02□□□□□ -2.09
NCK1P16333 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.02□□□□□ -2.09
NCK1P16333 RPS15AP12-201ENST00000419498 388 ntBASIC2.02□□□□□ -2.09
NCK1P16333 RPL23AP30-201ENST00000432419 501 ntBASIC2.02□□□□□ -2.09
NCK1P16333 AL118520.1-201ENST00000450770 291 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms