Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 MIR544B-201ENST00000582372 78 ntBASIC1.81□□□□□ -2.12
THRAP10827 MIR4509-2-201ENST00000583920 94 ntBASIC1.81□□□□□ -2.12
THRAP10827 AC078899.2-201ENST00000595282 212 ntBASIC1.81□□□□□ -2.12
THRAP10827 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.81□□□□□ -2.12
THRAP10827 BNIP3P23-201ENST00000599655 511 ntBASIC1.81□□□□□ -2.12
THRAP10827 RNU4-5P-201ENST00000607255 135 ntBASIC1.81□□□□□ -2.12
THRAP10827 AC090970.3-201ENST00000612566 866 ntBASIC1.81□□□□□ -2.12
THRAP10827 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.81□□□□□ -2.12
THRAP10827 MIR4509-1-201ENST00000618224 94 ntBASIC1.81□□□□□ -2.12
THRAP10827 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.81□□□□□ -2.12
THRAP10827 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
THRAP10827 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
THRAP10827 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
THRAP10827 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
THRAP10827 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.8□□□□□ -2.12
THRAP10827 MIR9-3-201ENST00000385084 90 ntBASIC1.8□□□□□ -2.12
THRAP10827 RNA5SP213-201ENST00000391031 106 ntBASIC1.8□□□□□ -2.12
THRAP10827 RNU6-817P-201ENST00000391083 104 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC119751.3-201ENST00000399720 670 ntBASIC1.8□□□□□ -2.12
THRAP10827 RNU2-20P-201ENST00000410425 191 ntBASIC1.8□□□□□ -2.12
THRAP10827 VPS26BP1-201ENST00000417155 755 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.8□□□□□ -2.12
THRAP10827 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.8□□□□□ -2.12
THRAP10827 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.8□□□□□ -2.12
THRAP10827 AC092648.1-201ENST00000425870 423 ntBASIC1.8□□□□□ -2.12
THRAP10827 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.8□□□□□ -2.12
THRAP10827 USP9YP24-201ENST00000434374 697 ntBASIC1.8□□□□□ -2.12
THRAP10827 LARP1BP3-201ENST00000437229 869 ntBASIC1.8□□□□□ -2.12
THRAP10827 USP9YP17-201ENST00000444617 696 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.8□□□□□ -2.12
THRAP10827 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.8□□□□□ -2.12
THRAP10827 RPL23AP35-201ENST00000451906 501 ntBASIC1.8□□□□□ -2.12
THRAP10827 FCF1P6-201ENST00000456841 595 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.8□□□□□ -2.12
THRAP10827 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.8□□□□□ -2.12
THRAP10827 MTND3P3-201ENST00000505004 126 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC008526.1-201ENST00000509149 338 ntBASIC1.8□□□□□ -2.12
THRAP10827 AF213884.2-201ENST00000510417 903 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.8□□□□□ -2.12
THRAP10827 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
THRAP10827 RNU6-143P-201ENST00000516942 93 ntBASIC1.8□□□□□ -2.12
THRAP10827 RNU6-1183P-201ENST00000517054 60 ntBASIC1.8□□□□□ -2.12
THRAP10827 SNORA31.23-201ENST00000517219 133 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.8□□□□□ -2.12
THRAP10827 AP004247.1-201ENST00000531556 1289 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.8□□□□□ -2.12
THRAP10827 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.8□□□□□ -2.12
THRAP10827 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.8□□□□□ -2.12
THRAP10827 AC090897.2-201ENST00000581715 130 ntBASIC1.8□□□□□ -2.12
THRAP10827 BCRP9-201ENST00000605312 388 ntBASIC1.8□□□□□ -2.12
THRAP10827 AL158042.1-201ENST00000605338 460 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC068276.1-201ENST00000605793 379 ntBASIC1.8□□□□□ -2.12
THRAP10827 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
THRAP10827 AL109620.1-201ENST00000618738 1197 ntBASIC1.8□□□□□ -2.12
THRAP10827 AC013470.4-201ENST00000619978 986 ntBASIC1.8□□□□□ -2.12
THRAP10827 U6.99-201ENST00000637524 83 ntBASIC1.8□□□□□ -2.12
THRAP10827 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.8□□□□□ -2.12
THRAP10827 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.8□□□□□ -2.12
THRAP10827 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
THRAP10827 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
THRAP10827 RNU6-433P-201ENST00000363216 104 ntBASIC1.79□□□□□ -2.12
THRAP10827 RNU6-188P-201ENST00000364207 107 ntBASIC1.79□□□□□ -2.12
THRAP10827 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.79□□□□□ -2.12
THRAP10827 MIR1302-8-201ENST00000408342 128 ntBASIC1.79□□□□□ -2.12
THRAP10827 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.79□□□□□ -2.12
THRAP10827 RNU2-63P-201ENST00000410792 194 ntBASIC1.79□□□□□ -2.12
THRAP10827 ELOCP9-201ENST00000418624 239 ntBASIC1.79□□□□□ -2.12
THRAP10827 AC093106.2-201ENST00000428212 385 ntBASIC1.79□□□□□ -2.12
THRAP10827 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.79□□□□□ -2.12
THRAP10827 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.79□□□□□ -2.12
THRAP10827 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.79□□□□□ -2.12
THRAP10827 RPL7P12-201ENST00000446719 750 ntBASIC1.79□□□□□ -2.12
THRAP10827 AC092001.1-201ENST00000453012 261 ntBASIC1.79□□□□□ -2.12
THRAP10827 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.79□□□□□ -2.12
THRAP10827 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.79□□□□□ -2.12
THRAP10827 RPL39P36-201ENST00000490784 156 ntBASIC1.79□□□□□ -2.12
THRAP10827 AC018437.1-201ENST00000492214 406 ntBASIC1.79□□□□□ -2.12
THRAP10827 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
THRAP10827 HSPE1P23-201ENST00000509838 286 ntBASIC1.79□□□□□ -2.12
THRAP10827 RNU6-581P-201ENST00000516214 105 ntBASIC1.79□□□□□ -2.12
THRAP10827 RNU2-19P-201ENST00000517288 84 ntBASIC1.79□□□□□ -2.12
THRAP10827 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.79□□□□□ -2.12
THRAP10827 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.79□□□□□ -2.12
THRAP10827 AC013828.2-201ENST00000532487 235 ntBASIC1.79□□□□□ -2.12
THRAP10827 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.79□□□□□ -2.12
THRAP10827 AC007375.1-201ENST00000554513 578 ntBASIC1.79□□□□□ -2.12
THRAP10827 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.79□□□□□ -2.12
THRAP10827 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
THRAP10827 MIR4782-201ENST00000577987 79 ntBASIC1.79□□□□□ -2.12
THRAP10827 AP000942.3-201ENST00000603702 160 ntBASIC1.79□□□□□ -2.12
THRAP10827 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.79□□□□□ -2.12
THRAP10827 AL391813.2-201ENST00000609113 322 ntBASIC1.79□□□□□ -2.12
THRAP10827 AL157392.4-201ENST00000609756 345 ntBASIC1.79□□□□□ -2.12
THRAP10827 AC091834.1-201ENST00000614543 472 ntBASIC1.79□□□□□ -2.12
THRAP10827 MIR6134-201ENST00000617606 109 ntBASIC1.79□□□□□ -2.12
THRAP10827 AL445984.1-201ENST00000637834 659 ntBASIC1.79□□□□□ -2.12
THRAP10827 MTND4P9-201ENST00000507819 1346 ntBASIC1.79□□□□□ -2.12
THRAP10827 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
THRAP10827 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
THRAP10827 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms