Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC009318.2-201ENST00000610917 651 ntBASIC1.64□□□□□ -2.15
CD28P10747 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.64□□□□□ -2.15
CD28P10747 AL391262.2-201ENST00000622466 494 ntBASIC1.64□□□□□ -2.15
CD28P10747 AC068787.1-201ENST00000623908 691 ntBASIC1.64□□□□□ -2.15
CD28P10747 AC006927.3-201ENST00000638789 384 ntBASIC1.64□□□□□ -2.15
CD28P10747 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CD28P10747 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CD28P10747 ZNF720P1-201ENST00000562403 1939 ntBASIC1.64□□□□□ -2.15
CD28P10747 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CD28P10747 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
CD28P10747 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.63□□□□□ -2.15
CD28P10747 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
CD28P10747 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CD28P10747 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.63□□□□□ -2.15
CD28P10747 HSPE1P11-201ENST00000339579 310 ntBASIC1.63□□□□□ -2.15
CD28P10747 SNORA38-201ENST00000363946 132 ntBASIC1.63□□□□□ -2.15
CD28P10747 RNY4P16-201ENST00000364768 94 ntBASIC1.63□□□□□ -2.15
CD28P10747 MIR301A-201ENST00000385261 86 ntBASIC1.63□□□□□ -2.15
CD28P10747 FCF1P10-201ENST00000407590 479 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.63□□□□□ -2.15
CD28P10747 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.63□□□□□ -2.15
CD28P10747 AL445646.1-201ENST00000431784 216 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.63□□□□□ -2.15
CD28P10747 FABP5P14-201ENST00000437273 393 ntBASIC1.63□□□□□ -2.15
CD28P10747 PGBD4P3-201ENST00000440731 581 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC016691.1-201ENST00000441321 413 ntBASIC1.63□□□□□ -2.15
CD28P10747 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 AC092001.1-201ENST00000453012 261 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.63□□□□□ -2.15
CD28P10747 AP001324.2-201ENST00000461163 319 ntBASIC1.63□□□□□ -2.15
CD28P10747 RPL23AP42-201ENST00000471152 471 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.63□□□□□ -2.15
CD28P10747 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 AC112204.1-201ENST00000502591 103 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 RNA5SP112-201ENST00000515937 99 ntBASIC1.63□□□□□ -2.15
CD28P10747 RNU2-10P-201ENST00000516375 211 ntBASIC1.63□□□□□ -2.15
CD28P10747 RNU6-914P-201ENST00000516749 109 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 AP003122.4-201ENST00000530980 758 ntBASIC1.63□□□□□ -2.15
CD28P10747 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.63□□□□□ -2.15
CD28P10747 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 PCMTD1P2-201ENST00000565017 355 ntBASIC1.63□□□□□ -2.15
CD28P10747 MIR4765-201ENST00000585007 77 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.63□□□□□ -2.15
CD28P10747 AC121334.2-201ENST00000605387 271 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC022893.3-201ENST00000607665 437 ntBASIC1.63□□□□□ -2.15
CD28P10747 AC034229.4-201ENST00000607861 441 ntBASIC1.63□□□□□ -2.15
CD28P10747 Y_RNA.783-201ENST00000613546 102 ntBASIC1.63□□□□□ -2.15
CD28P10747 AL356266.1-201ENST00000623311 483 ntBASIC1.63□□□□□ -2.15
CD28P10747 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
CD28P10747 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CD28P10747 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.63□□□□□ -2.15
CD28P10747 AC002543.1-201ENST00000299783 1954 ntBASIC1.62□□□□□ -2.15
CD28P10747 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CD28P10747 RNU1-72P-201ENST00000362976 153 ntBASIC1.62□□□□□ -2.15
CD28P10747 RNU5F-6P-201ENST00000362979 116 ntBASIC1.62□□□□□ -2.15
CD28P10747 RNA5SP37-201ENST00000365420 130 ntBASIC1.62□□□□□ -2.15
CD28P10747 RNU6-809P-201ENST00000384461 107 ntBASIC1.62□□□□□ -2.15
CD28P10747 SNORA48.3-201ENST00000391081 134 ntBASIC1.62□□□□□ -2.15
CD28P10747 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CD28P10747 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.62□□□□□ -2.15
CD28P10747 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.62□□□□□ -2.15
CD28P10747 AC006366.1-201ENST00000422002 759 ntBASIC1.62□□□□□ -2.15
CD28P10747 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.62□□□□□ -2.15
CD28P10747 AL365184.2-201ENST00000431139 435 ntBASIC1.62□□□□□ -2.15
CD28P10747 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.62□□□□□ -2.15
CD28P10747 RPL7P34-201ENST00000433316 712 ntBASIC1.62□□□□□ -2.15
CD28P10747 AL591212.2-201ENST00000433923 257 ntBASIC1.62□□□□□ -2.15
CD28P10747 AL008629.1-201ENST00000438615 184 ntBASIC1.62□□□□□ -2.15
CD28P10747 MTND4P25-201ENST00000441039 533 ntBASIC1.62□□□□□ -2.15
CD28P10747 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.62□□□□□ -2.15
CD28P10747 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.62□□□□□ -2.15
CD28P10747 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.62□□□□□ -2.15
CD28P10747 KLF3P2-201ENST00000465138 268 ntBASIC1.62□□□□□ -2.15
CD28P10747 MTCO2P29-201ENST00000465212 189 ntBASIC1.62□□□□□ -2.15
CD28P10747 RPL7P43-201ENST00000478876 753 ntBASIC1.62□□□□□ -2.15
CD28P10747 AC023194.1-201ENST00000493084 308 ntBASIC1.62□□□□□ -2.15
CD28P10747 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.62□□□□□ -2.15
CD28P10747 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.62□□□□□ -2.15
CD28P10747 MTND4P2-201ENST00000507767 1203 ntBASIC1.62□□□□□ -2.15
CD28P10747 MRPS33P3-201ENST00000513456 322 ntBASIC1.62□□□□□ -2.15
CD28P10747 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.62□□□□□ -2.15
CD28P10747 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.62□□□□□ -2.15
CD28P10747 AC116347.2-201ENST00000514912 523 ntBASIC1.62□□□□□ -2.15
CD28P10747 MIR892C-201ENST00000516410 77 ntBASIC1.62□□□□□ -2.15
CD28P10747 RN7SKP265-201ENST00000516448 223 ntBASIC1.62□□□□□ -2.15
CD28P10747 RNU6-572P-201ENST00000516724 80 ntBASIC1.62□□□□□ -2.15
CD28P10747 RNU6-677P-201ENST00000516914 101 ntBASIC1.62□□□□□ -2.15
CD28P10747 RNU6-143P-201ENST00000516942 93 ntBASIC1.62□□□□□ -2.15
CD28P10747 AC025755.1-201ENST00000521306 278 ntBASIC1.62□□□□□ -2.15
CD28P10747 AC011979.2-201ENST00000527568 352 ntBASIC1.62□□□□□ -2.15
CD28P10747 AC079598.5-201ENST00000547460 117 ntBASIC1.62□□□□□ -2.15
CD28P10747 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms