Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC013476.2-201ENST00000614456 459 ntBASIC1□□□□□ -2.25
FREM3P0C091 AP000560.1-201ENST00000624150 1937 ntBASIC1□□□□□ -2.25
FREM3P0C091 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
FREM3P0C091 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
FREM3P0C091 MIR16-2-201ENST00000362117 81 ntBASIC1□□□□□ -2.25
FREM3P0C091 Y_RNA.112-201ENST00000363250 102 ntBASIC1□□□□□ -2.25
FREM3P0C091 RNU1-39P-201ENST00000383897 165 ntBASIC1□□□□□ -2.25
FREM3P0C091 MIR598-201ENST00000384868 97 ntBASIC1□□□□□ -2.25
FREM3P0C091 RNU6-932P-201ENST00000391108 106 ntBASIC1□□□□□ -2.25
FREM3P0C091 RNU6-516P-201ENST00000411381 104 ntBASIC1□□□□□ -2.25
FREM3P0C091 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1□□□□□ -2.25
FREM3P0C091 TRIM60P13-201ENST00000432350 1283 ntBASIC1□□□□□ -2.25
FREM3P0C091 AC245102.2-201ENST00000448956 180 ntBASIC1□□□□□ -2.25
FREM3P0C091 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1□□□□□ -2.25
FREM3P0C091 AP005660.1-201ENST00000522972 293 ntBASIC1□□□□□ -2.25
FREM3P0C091 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1□□□□□ -2.25
FREM3P0C091 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1□□□□□ -2.25
FREM3P0C091 AL132857.1-201ENST00000555180 708 ntBASIC1□□□□□ -2.25
FREM3P0C091 HSBP1P1-201ENST00000555205 166 ntBASIC1□□□□□ -2.25
FREM3P0C091 AC090615.1-201ENST00000577519 154 ntBASIC1□□□□□ -2.25
FREM3P0C091 MIR3167-201ENST00000579623 85 ntBASIC1□□□□□ -2.25
FREM3P0C091 MIR6078-201ENST00000611069 100 ntBASIC1□□□□□ -2.25
FREM3P0C091 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1□□□□□ -2.25
FREM3P0C091 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1□□□□□ -2.25
FREM3P0C091 AC009268.2-201ENST00000621925 457 ntBASIC1□□□□□ -2.25
FREM3P0C091 RNU11-3P-201ENST00000391111 133 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 USP9YP24-201ENST00000434374 697 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 MTND2P29-201ENST00000438595 412 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 HMGB1P36-201ENST00000487709 576 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 RPL22P13-201ENST00000493291 347 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 FABP5P5-201ENST00000515537 406 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 AP000907.2-201ENST00000530827 353 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 AC016925.2-201ENST00000605108 242 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 AC239868.4-201ENST00000608318 671 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 DUSP12P1-201ENST00000612874 516 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 AC022202.1-201ENST00000613515 211 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.99□□□□□ -2.25
FREM3P0C091 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.99□□□□□ -2.25
FREM3P0C091 AL390862.1-201ENST00000635467 1469 ntBASIC0.99□□□□□ -2.25
FREM3P0C091 MIR217-201ENST00000384817 110 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 MIR506-201ENST00000384998 124 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 HMGN2P39-201ENST00000398005 273 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 ERHP2-201ENST00000402323 299 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 USP9YP26-201ENST00000421008 661 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.98□□□□□ -2.25
FREM3P0C091 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 ZFAND6P1-201ENST00000434138 605 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 AL353706.1-201ENST00000436728 494 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 AC244505.5-201ENST00000443639 207 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 RPL23AP6-201ENST00000446637 472 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 RPL7P55-201ENST00000450522 746 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.98□□□□□ -2.25
FREM3P0C091 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.98□□□□□ -2.25
FREM3P0C091 MIR4713-201ENST00000582691 75 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 AC243960.4-201ENST00000600532 288 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.98□□□□□ -2.25
FREM3P0C091 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.98□□□□□ -2.25
FREM3P0C091 RNU1-93P-201ENST00000364704 169 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 HMGB1P17-201ENST00000403495 628 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 MTCYBP38-201ENST00000417160 1123 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 AC007435.1-201ENST00000421086 415 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 GPM6BP2-201ENST00000432046 144 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.98□□□□□ -2.25
FREM3P0C091 GPM6BP1-201ENST00000446387 144 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.98□□□□□ -2.25
FREM3P0C091 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.98□□□□□ -2.25
FREM3P0C091 AC018437.1-201ENST00000492214 406 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.98□□□□□ -2.25
FREM3P0C091 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.98□□□□□ -2.25
FREM3P0C091 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.98□□□□□ -2.25
FREM3P0C091 RNU6-362P-201ENST00000516736 90 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 RNA5SP137-201ENST00000516833 135 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.98□□□□□ -2.25
FREM3P0C091 BNIP3P23-201ENST00000599655 511 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.98□□□□□ -2.25
FREM3P0C091 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.98□□□□□ -2.25
FREM3P0C091 AC097655.1-201ENST00000635075 318 ntBASIC0.98□□□□□ -2.25
FREM3P0C091 SNORA40C-201ENST00000391285 128 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 MTCYBP32-201ENST00000427945 1084 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.97□□□□□ -2.25
FREM3P0C091 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.97□□□□□ -2.25
FREM3P0C091 KATNBL1P3-201ENST00000443475 909 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 AC087884.1-201ENST00000469738 328 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.97□□□□□ -2.25
FREM3P0C091 RNU6-714P-201ENST00000516963 103 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 AC006199.1-201ENST00000548728 219 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 CYP3A137P-201ENST00000562436 69 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 AC022254.1-201ENST00000567857 235 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.97□□□□□ -2.25
FREM3P0C091 AC091057.3-201ENST00000602684 733 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 AC026741.1-201ENST00000605892 482 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.97□□□□□ -2.25
FREM3P0C091 MIR518A2-201ENST00000384966 87 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 MIR561-201ENST00000385216 97 ntBASIC0.97□□□□□ -2.25
FREM3P0C091 OR9R1P-201ENST00000412200 877 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms