Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC6P09630 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXC6P09630 MIR4424-201ENST00000585257 86 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 CTHRC1P1-201ENST00000605383 469 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AL050343.2-201ENST00000607338 280 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AC130324.3-201ENST00000614165 542 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC6P09630 PLCE1P1-201ENST00000622094 305 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 MIR1302-1-201ENST00000637932 143 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HOXC6P09630 API5P2-201ENST00000397055 1498 ntBASIC3.27□□□□□ -1.89
HOXC6P09630 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC6P09630 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HOXC6P09630 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC6P09630 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC6P09630 RNU6-522P-201ENST00000364497 107 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 U3.12-201ENST00000364498 214 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 SNORA23-201ENST00000365128 182 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 Y_RNA.378-201ENST00000365652 113 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC6P09630 RNU6-946P-201ENST00000383878 107 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 MIR607-201ENST00000385241 96 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 RNU6-510P-201ENST00000391239 108 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 RNU2-29P-201ENST00000410423 189 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 RNU2-52P-201ENST00000410680 190 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC6P09630 AC009161.1-201ENST00000417306 376 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 AL137014.1-201ENST00000420490 1226 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 RAC1P6-201ENST00000423911 575 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 AC079780.1-201ENST00000428259 207 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 RPL21P112-201ENST00000434403 463 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 AC024082.2-201ENST00000434771 238 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 AC090774.1-201ENST00000435925 246 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 MTCO3P45-201ENST00000443036 613 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 PRPS1P1-201ENST00000445305 876 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 AC020550.1-201ENST00000447385 163 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC6P09630 AC233279.1-201ENST00000455300 423 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 MTCO3P9-201ENST00000506989 781 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 AC108078.2-201ENST00000510750 236 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC6P09630 RPL23AP84-201ENST00000571193 464 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 SNHG22-203ENST00000617833 660 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC6P09630 MIR7153-201ENST00000637758 57 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 DDX10P1-201ENST00000448545 1933 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HOXC6P09630 AC010733.2-201ENST00000589496 5702 ntBASIC3.26□□□□□ -1.89
HOXC6P09630 MTND4P14-201ENST00000435799 1354 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC6P09630 AC005183.1-201ENST00000603687 1979 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 AC007256.1-201ENST00000392253 2765 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 RNU6-1287P-201ENST00000362914 107 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 RNU6-1284P-201ENST00000363701 100 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 RNU6-805P-201ENST00000365643 106 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 XGY1-201ENST00000381172 446 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 RNU6-116P-201ENST00000384042 109 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 RNU6-629P-201ENST00000384061 103 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 RNU6-1060P-201ENST00000384664 107 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 MIR591-201ENST00000385290 95 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HOXC6P09630 AL359634.1-202ENST00000404721 284 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 TXNP7-201ENST00000406296 293 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 RNU4-26P-201ENST00000410270 107 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 RPL7P46-201ENST00000425129 740 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXC6P09630 AL118496.2-201ENST00000448300 230 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 PPP1R2P5-201ENST00000457256 603 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 SNRPFP3-201ENST00000457792 225 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC6P09630 MTND4P17-201ENST00000470444 350 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC6P09630 AC006445.2-201ENST00000510061 472 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC6P09630 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC6P09630 AP004371.1-201ENST00000525240 214 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 AC091544.4-201ENST00000555268 342 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXC6P09630 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC6P09630 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC6P09630 uc_338.34-201ENST00000617467 174 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 AC243829.7-201ENST00000633081 225 ntBASIC3.25□□□□□ -1.89
HOXC6P09630 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC6P09630 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC6P09630 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC6P09630 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HOXC6P09630 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC6P09630 RNU6-1252P-201ENST00000363054 104 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 SNORA46-201ENST00000384762 135 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 MIR34A-201ENST00000385130 110 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 AL356057.2-201ENST00000403318 432 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 NDUFS5P1-201ENST00000405668 289 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 RPS20P15-201ENST00000412792 311 ntBASIC3.24□□□□□ -1.89
HOXC6P09630 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXC6P09630 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXC6P09630 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXC6P09630 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXC6P09630 HMGB1P18-201ENST00000438801 619 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms