Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CRYBB2P1-203ENST00000415709 538 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 OR4C10P-201ENST00000434991 931 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AC016831.4-201ENST00000438302 307 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AL450023.3-201ENST00000440592 271 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AC007969.2-201ENST00000441891 191 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 GPM6BP3-201ENST00000442797 145 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AC000111.2-201ENST00000448200 210 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AC084357.1-201ENST00000473404 255 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 MRPL42P6-201ENST00000486397 371 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AC016632.1-201ENST00000503994 196 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 RN7SKP49-201ENST00000516675 260 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 RNU6-1198P-201ENST00000516904 67 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AC027288.2-201ENST00000553028 243 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AL110118.1-201ENST00000553543 400 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 MIR3690-201ENST00000580266 75 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AL356218.2-201ENST00000605264 187 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AL021997.2-201ENST00000615674 271 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AC019206.1-201ENST00000621938 425 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AC127459.3-201ENST00000624328 466 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 SNORA43.4-201ENST00000629559 138 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFAP04085 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PDGFAP04085 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFAP04085 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.46□□□□□ -1.7
PDGFAP04085 MAPK10-263ENST00000641052 4307 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PDGFAP04085 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFAP04085 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFAP04085 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFAP04085 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFAP04085 AC139713.2-215ENST00000641428 5037 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFAP04085 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 Y_RNA.44-201ENST00000362676 108 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 RNU6-1141P-201ENST00000364520 107 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 RNU6-1280P-201ENST00000365211 107 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 RNU6-1035P-201ENST00000384477 107 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 MIR544A-201ENST00000384855 91 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 AL035079.1-201ENST00000405210 287 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 FTH1P15-201ENST00000406984 280 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.45□□□□□ -1.7
PDGFAP04085 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFAP04085 AC114755.2-201ENST00000413520 361 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.45□□□□□ -1.7
PDGFAP04085 AC012308.1-201ENST00000451232 178 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 AL691482.1-201ENST00000453255 87 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 RPS5P7-201ENST00000456664 608 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 Y_RNA.644-201ENST00000459006 113 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 SNRPGP7-201ENST00000469016 106 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 AC108751.2-201ENST00000469993 231 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 S100A11P1-201ENST00000477525 312 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.45□□□□□ -1.7
PDGFAP04085 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.45□□□□□ -1.7
PDGFAP04085 Y_RNA.674-201ENST00000516362 113 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 HSPE1P4-201ENST00000550617 308 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.45□□□□□ -1.7
PDGFAP04085 MIR5571-201ENST00000577998 113 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 AC022726.1-201ENST00000587475 207 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFAP04085 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFAP04085 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PDGFAP04085 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PDGFAP04085 AC092435.4-201ENST00000623012 4159 ntBASIC4.45□□□□□ -1.7
PDGFAP04085 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFAP04085 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFAP04085 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFAP04085 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFAP04085 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PDGFAP04085 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFAP04085 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PDGFAP04085 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.44□□□□□ -1.7
PDGFAP04085 RNA5SP361-201ENST00000362686 118 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 Y_RNA.199-201ENST00000364014 102 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 RNA5SP515-201ENST00000364570 118 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 RNU6-326P-201ENST00000365480 107 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 RNU6-886P-201ENST00000384319 105 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 RNU6-21P-201ENST00000384710 107 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFAP04085 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFAP04085 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFAP04085 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFAP04085 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFAP04085 NDUFS5P3-201ENST00000450668 321 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 AC091153.1-201ENST00000466297 402 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 RPS27AP10-201ENST00000496103 208 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 AC026784.1-201ENST00000507986 352 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 AC026402.1-201ENST00000513642 170 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.44□□□□□ -1.7
PDGFAP04085 RNU6-789P-201ENST00000517105 102 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 RN7SKP289-201ENST00000517244 295 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 AC011602.1-201ENST00000546484 331 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 AK6P2-201ENST00000549020 471 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 MIR4643-201ENST00000577473 78 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 MIR5695-201ENST00000579717 85 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 AL451007.1-201ENST00000595491 289 ntBASIC4.44□□□□□ -1.7
PDGFAP04085 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFAP04085 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PDGFAP04085 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms