Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 GPM6BP3-201ENST00000442797 145 ntBASIC1.52□□□□□ -2.17
CPSF4O95639 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.52□□□□□ -2.17
CPSF4O95639 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.52□□□□□ -2.17
CPSF4O95639 MTATP6P7-201ENST00000453315 681 ntBASIC1.52□□□□□ -2.17
CPSF4O95639 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.52□□□□□ -2.17
CPSF4O95639 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.52□□□□□ -2.17
CPSF4O95639 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.52□□□□□ -2.17
CPSF4O95639 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.52□□□□□ -2.17
CPSF4O95639 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.52□□□□□ -2.17
CPSF4O95639 RNU6-415P-201ENST00000516252 97 ntBASIC1.52□□□□□ -2.17
CPSF4O95639 RNU6-250P-201ENST00000516958 103 ntBASIC1.52□□□□□ -2.17
CPSF4O95639 RPS3AP4-201ENST00000555161 764 ntBASIC1.52□□□□□ -2.17
CPSF4O95639 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.52□□□□□ -2.17
CPSF4O95639 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.52□□□□□ -2.17
CPSF4O95639 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.52□□□□□ -2.17
CPSF4O95639 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.52□□□□□ -2.17
CPSF4O95639 AC008121.1-201ENST00000603244 268 ntBASIC1.52□□□□□ -2.17
CPSF4O95639 AC007490.1-201ENST00000624321 703 ntBASIC1.52□□□□□ -2.17
CPSF4O95639 AC092192.1-201ENST00000633154 1018 ntBASIC1.52□□□□□ -2.17
CPSF4O95639 AC010329.5-201ENST00000623497 2174 ntBASIC1.52□□□□□ -2.17
CPSF4O95639 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CPSF4O95639 MTND4P27-201ENST00000450813 1354 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.51□□□□□ -2.17
CPSF4O95639 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CPSF4O95639 RNU6-1214P-201ENST00000363650 109 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 RNU6-288P-201ENST00000363690 104 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 RNY4P16-201ENST00000364768 94 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 MIR218-1-201ENST00000384999 110 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 U8.13-201ENST00000390842 128 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 SNORD23.1-201ENST00000408212 104 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4O95639 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4O95639 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.51□□□□□ -2.17
CPSF4O95639 AL109913.1-201ENST00000421173 514 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4O95639 RPS27AP14-201ENST00000422868 454 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 RAC1P6-201ENST00000423911 575 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AL353777.1-201ENST00000425552 326 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC007560.1-201ENST00000426912 237 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC093106.2-201ENST00000428212 385 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AL161651.1-201ENST00000440882 223 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 SSXP1-201ENST00000453640 473 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 RPL39P36-201ENST00000490784 156 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.51□□□□□ -2.17
CPSF4O95639 MTND4P2-201ENST00000507767 1203 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC023141.11-201ENST00000508864 202 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 RNU1-41P-201ENST00000516161 162 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 RNU1-48P-201ENST00000516400 162 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 RNU6-201P-201ENST00000517100 61 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC107934.1-201ENST00000522215 217 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AP001372.4-201ENST00000524889 472 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AP003461.1-201ENST00000528866 78 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4O95639 AL121821.2-201ENST00000556081 394 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4O95639 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4O95639 MIR3167-201ENST00000579623 85 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 MIR3199-1-201ENST00000582434 88 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.51□□□□□ -2.17
CPSF4O95639 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.51□□□□□ -2.17
CPSF4O95639 AP001981.2-201ENST00000603241 418 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC091152.3-201ENST00000604227 325 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 MIR6845-201ENST00000613182 61 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC010678.1-201ENST00000614118 713 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 uc_338.12-201ENST00000616344 181 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AL589994.2-201ENST00000621124 579 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AL391262.2-201ENST00000622466 494 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC068787.1-201ENST00000623908 691 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 AC007671.2-201ENST00000637344 619 ntBASIC1.51□□□□□ -2.17
CPSF4O95639 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4O95639 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
CPSF4O95639 AL356292.1-201ENST00000283110 373 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 RNU6-511P-201ENST00000363496 107 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 RNA5SP126-201ENST00000365092 109 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
CPSF4O95639 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.5□□□□□ -2.17
CPSF4O95639 MIR504-201ENST00000385065 83 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 RNU6-817P-201ENST00000391083 104 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 FCF1P10-201ENST00000407590 479 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 RNU2-62P-201ENST00000410868 191 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 RPS12P24-201ENST00000412619 387 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 AL356379.1-201ENST00000414105 126 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.5□□□□□ -2.17
CPSF4O95639 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.5□□□□□ -2.17
CPSF4O95639 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.5□□□□□ -2.17
CPSF4O95639 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.5□□□□□ -2.17
CPSF4O95639 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.5□□□□□ -2.17
CPSF4O95639 RNU6-581P-201ENST00000516214 105 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 SNORD19.2-201ENST00000516978 73 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 RNU6-1183P-201ENST00000517054 60 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 AC022616.6-201ENST00000520479 119 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.5□□□□□ -2.17
CPSF4O95639 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.5□□□□□ -2.17
CPSF4O95639 ELOCP32-201ENST00000548625 324 ntBASIC1.5□□□□□ -2.17
CPSF4O95639 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms