Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 Z75746.1-201ENST00000440243 2080 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 CBX3P1-201ENST00000325243 554 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 RNU11-3P-201ENST00000391111 133 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 RNU2-33P-201ENST00000410344 192 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCA1O95477 AL590623.1-201ENST00000427864 105 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.76□□□□□ -2.29
ABCA1O95477 AL592447.1-201ENST00000447592 540 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AC079448.1-201ENST00000449377 373 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AL590365.1-201ENST00000450788 243 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 RPL36AP48-201ENST00000485521 314 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AP001025.1-201ENST00000486139 332 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 MRPS33P3-201ENST00000513456 322 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AC104997.1-201ENST00000519761 717 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AC034114.1-201ENST00000520293 285 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.76□□□□□ -2.29
ABCA1O95477 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCA1O95477 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.76□□□□□ -2.29
ABCA1O95477 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCA1O95477 AC021739.1-201ENST00000559631 174 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
ABCA1O95477 Y_RNA.258-201ENST00000364613 105 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 RNU6-17P-201ENST00000384245 107 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 RNU6-18P-201ENST00000384527 107 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AC068050.1-201ENST00000394891 380 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 MIR1197-201ENST00000408818 88 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AC078974.1-201ENST00000411597 223 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 EIF4EP2-201ENST00000422816 654 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.76□□□□□ -2.29
ABCA1O95477 NDUFA5P7-201ENST00000452914 242 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.76□□□□□ -2.29
ABCA1O95477 LARP1BP2-201ENST00000486594 519 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 RNU6-416P-201ENST00000516265 103 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 RNA5SP291-201ENST00000517222 105 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 EIF1AXP2-201ENST00000555940 413 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AC018638.7-201ENST00000605836 1114 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCA1O95477 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.76□□□□□ -2.29
ABCA1O95477 AL356473.1-201ENST00000406203 1408 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 MIR135A2-201ENST00000384854 100 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AL356131.1-201ENST00000405826 414 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC009310.1-201ENST00000414414 451 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AL591704.2-201ENST00000421658 181 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC092648.1-201ENST00000425870 423 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 SNRPEP9-201ENST00000436794 238 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 MTCO2P20-201ENST00000437339 673 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 GTF2IP12-201ENST00000456547 356 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.75□□□□□ -2.29
ABCA1O95477 AC125611.1-201ENST00000549563 229 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.75□□□□□ -2.29
ABCA1O95477 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.75□□□□□ -2.29
ABCA1O95477 MIR4713-201ENST00000582691 75 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.75□□□□□ -2.29
ABCA1O95477 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.75□□□□□ -2.29
ABCA1O95477 AL163051.2-201ENST00000618976 735 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
ABCA1O95477 AC091965.5-201ENST00000624785 342 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
ABCA1O95477 Y_RNA.85-201ENST00000363014 111 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AL596276.1-201ENST00000434465 418 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AL022238.1-201ENST00000442557 355 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.75□□□□□ -2.29
ABCA1O95477 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.75□□□□□ -2.29
ABCA1O95477 AC092989.1-201ENST00000481235 277 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC084024.2-201ENST00000503480 791 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.75□□□□□ -2.29
ABCA1O95477 AL359212.1-201ENST00000556608 614 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC026271.5-201ENST00000577873 130 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.75□□□□□ -2.29
ABCA1O95477 AL357094.1-201ENST00000603845 844 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC024257.5-201ENST00000612739 531 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AL109933.3-201ENST00000619095 188 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC004009.2-201ENST00000623016 728 ntBASIC0.75□□□□□ -2.29
ABCA1O95477 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.74□□□□□ -2.29
ABCA1O95477 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.74□□□□□ -2.29
ABCA1O95477 Y_RNA.294-201ENST00000364916 102 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 Y_RNA.390-201ENST00000383932 102 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 RNU6-140P-201ENST00000384566 108 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 RNU1-78P-201ENST00000391248 165 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 RPL26P27-201ENST00000414397 437 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 AC096920.1-201ENST00000423991 241 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 PSMA6P3-201ENST00000428242 164 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 RPL31P54-201ENST00000429803 370 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.74□□□□□ -2.29
ABCA1O95477 AL353718.1-201ENST00000451028 517 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
ABCA1O95477 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.74□□□□□ -2.29
ABCA1O95477 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.74□□□□□ -2.29
ABCA1O95477 HMGB1P35-201ENST00000503360 598 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.74□□□□□ -2.29
ABCA1O95477 AC093510.2-201ENST00000562820 896 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.74□□□□□ -2.29
ABCA1O95477 AL139344.1-201ENST00000605228 195 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 AC007742.2-201ENST00000618226 398 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.74□□□□□ -2.29
ABCA1O95477 MIR561-201ENST00000385216 97 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms