Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC025811.1-201ENST00000604312 472 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AP000860.1-201ENST00000605250 559 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC138749.5-201ENST00000611461 208 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 MIR6845-201ENST00000613182 61 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC009090.3-201ENST00000616553 565 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC116165.2-201ENST00000616705 206 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 MTND1P37-201ENST00000636562 264 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CTDNEP1O95476 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CTDNEP1O95476 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CTDNEP1O95476 RNY4P24-201ENST00000362735 96 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 RNY3P13-201ENST00000365542 102 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 SNORD116-8-201ENST00000384365 95 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 MT-TH-201ENST00000387441 69 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 SNORA26.8-201ENST00000391306 124 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 AL021407.1-201ENST00000404531 386 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 PIGFP3-201ENST00000441918 722 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC138853.1-201ENST00000503549 823 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC114786.4-201ENST00000508771 728 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 SCARNA11.3-201ENST00000517276 130 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 ARL2BPP2-201ENST00000550907 489 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC104581.2-201ENST00000572227 430 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 HMGN1P30-201ENST00000589286 268 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 AP001981.2-201ENST00000603241 418 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC025594.3-201ENST00000613068 790 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 MIR4275-201ENST00000636486 87 ntBASIC2.02□□□□□ -2.09
CTDNEP1O95476 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
CTDNEP1O95476 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AL356292.1-201ENST00000283110 373 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 RNU6-511P-201ENST00000363496 107 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CTDNEP1O95476 RNU6-14P-201ENST00000384630 106 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 U3.40-201ENST00000408706 208 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 RNU2-33P-201ENST00000410344 192 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC009518.2-201ENST00000418056 731 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC007919.1-201ENST00000429380 217 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC244035.1-201ENST00000430042 390 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 MTND1P30-201ENST00000441241 901 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 UBE2D3P4-201ENST00000441973 436 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 TAF9P1-201ENST00000445421 515 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC098826.2-201ENST00000452011 651 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 TAF9P2-201ENST00000454958 515 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 RPL23AP41-201ENST00000484754 458 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC112204.1-201ENST00000502591 103 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 RNU6-390P-201ENST00000516259 103 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AL391261.3-201ENST00000557194 520 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.01□□□□□ -2.09
CTDNEP1O95476 KC877982.1-201ENST00000602313 470 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC136601.2-201ENST00000604356 474 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AL161729.4-201ENST00000604650 476 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 SNORD14A-201ENST00000606526 91 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 uc_338.12-201ENST00000616344 181 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 AC091931.1-201ENST00000623488 728 ntBASIC2.01□□□□□ -2.09
CTDNEP1O95476 MTND4P4-201ENST00000439033 1366 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 RNU6-217P-201ENST00000384164 104 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 RNU2-36P-201ENST00000410361 191 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2□□□□□ -2.09
CTDNEP1O95476 AL589872.1-201ENST00000426602 288 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AC093106.2-201ENST00000428212 385 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2□□□□□ -2.09
CTDNEP1O95476 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2□□□□□ -2.09
CTDNEP1O95476 USP12PX-201ENST00000432383 1057 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 MTND1P28-201ENST00000435623 950 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2□□□□□ -2.09
CTDNEP1O95476 RPL22P17-201ENST00000438729 315 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 Z82210.1-201ENST00000440037 231 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2□□□□□ -2.09
CTDNEP1O95476 RPS20P22-201ENST00000473700 357 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 RN7SL429P-201ENST00000479090 223 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 RN7SL489P-201ENST00000486185 223 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 RN7SL327P-201ENST00000488659 223 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 RPL23AP63-201ENST00000498752 471 ntBASIC2□□□□□ -2.09
CTDNEP1O95476 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2□□□□□ -2.09
CTDNEP1O95476 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2□□□□□ -2.09
CTDNEP1O95476 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms