Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MBD4O95243 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.15□□□□□ -1.9
MBD4O95243 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MBD4O95243 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.15□□□□□ -1.91
MBD4O95243 SNORA62.1-201ENST00000364287 154 ntBASIC3.15□□□□□ -1.91
MBD4O95243 RNU6-1280P-201ENST00000365211 107 ntBASIC3.15□□□□□ -1.91
MBD4O95243 RNU6-898P-201ENST00000365627 104 ntBASIC3.15□□□□□ -1.91
MBD4O95243 SET-203ENST00000372688 801 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD4O95243 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
MBD4O95243 Y_RNA.500-201ENST00000384466 111 ntBASIC3.15□□□□□ -1.91
MBD4O95243 MIR1-2-201ENST00000384961 85 ntBASIC3.15□□□□□ -1.91
MBD4O95243 MIR147B-201ENST00000390185 80 ntBASIC3.15□□□□□ -1.91
MBD4O95243 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MBD4O95243 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MBD4O95243 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD4O95243 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD4O95243 AL358934.1-201ENST00000432346 324 ntBASIC3.15□□□□□ -1.91
MBD4O95243 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD4O95243 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD4O95243 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.15□□□□□ -1.91
MBD4O95243 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.15□□□□□ -1.91
MBD4O95243 MRPL50P4-201ENST00000446432 475 ntBASIC3.15□□□□□ -1.91
MBD4O95243 RPL23AP20-201ENST00000447965 421 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AC104058.1-201ENST00000448028 297 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AC132479.1-201ENST00000449160 144 ntBASIC3.15□□□□□ -1.91
MBD4O95243 NDUFB1P2-201ENST00000449477 176 ntBASIC3.15□□□□□ -1.91
MBD4O95243 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AL583843.1-201ENST00000456070 346 ntBASIC3.15□□□□□ -1.91
MBD4O95243 RPL23AP70-201ENST00000483361 460 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AC022493.1-201ENST00000492984 337 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AC104806.1-201ENST00000508720 308 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD4O95243 AC010493.1-201ENST00000513479 292 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AC096725.1-201ENST00000514266 313 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AC112206.3-201ENST00000514578 389 ntBASIC3.15□□□□□ -1.91
MBD4O95243 RNU4-29P-201ENST00000515943 174 ntBASIC3.15□□□□□ -1.91
MBD4O95243 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MBD4O95243 AP005136.1-201ENST00000579765 429 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD4O95243 MIR3616-201ENST00000584070 92 ntBASIC3.15□□□□□ -1.91
MBD4O95243 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD4O95243 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.15□□□□□ -1.91
MBD4O95243 DEFB131E-202ENST00000602581 683 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AL645944.1-201ENST00000603857 493 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AL138889.2-201ENST00000603883 242 ntBASIC3.15□□□□□ -1.91
MBD4O95243 AC107871.2-201ENST00000612894 502 ntBASIC3.15□□□□□ -1.91
MBD4O95243 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MBD4O95243 uc_338.11-201ENST00000619132 160 ntBASIC3.15□□□□□ -1.91
MBD4O95243 MIR6733-201ENST00000635723 61 ntBASIC3.15□□□□□ -1.91
MBD4O95243 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
MBD4O95243 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD4O95243 MTND5P30-201ENST00000452896 1731 ntBASIC3.14□□□□□ -1.91
MBD4O95243 RNU6-461P-201ENST00000364195 107 ntBASIC3.14□□□□□ -1.91
MBD4O95243 RNU4-48P-201ENST00000365559 182 ntBASIC3.14□□□□□ -1.91
MBD4O95243 SNORA75B-201ENST00000384053 137 ntBASIC3.14□□□□□ -1.91
MBD4O95243 RNU6-748P-201ENST00000384648 107 ntBASIC3.14□□□□□ -1.91
MBD4O95243 Y_RNA.623-201ENST00000411128 95 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AL031779.1-201ENST00000415663 330 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.14□□□□□ -1.91
MBD4O95243 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.14□□□□□ -1.91
MBD4O95243 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD4O95243 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD4O95243 AL627311.1-201ENST00000431514 115 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.14□□□□□ -1.91
MBD4O95243 RPL39P40-201ENST00000445481 146 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD4O95243 CACYBPP2-201ENST00000453625 678 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AL441985.1-201ENST00000457727 251 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD4O95243 SRIP1-201ENST00000489235 288 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.14□□□□□ -1.91
MBD4O95243 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD4O95243 RNU6-581P-201ENST00000516214 105 ntBASIC3.14□□□□□ -1.91
MBD4O95243 SNORA31.18-201ENST00000517043 134 ntBASIC3.14□□□□□ -1.91
MBD4O95243 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.14□□□□□ -1.91
MBD4O95243 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD4O95243 AP000889.1-201ENST00000530968 660 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD4O95243 SUB1P2-201ENST00000556401 297 ntBASIC3.14□□□□□ -1.91
MBD4O95243 MIR3611-201ENST00000584484 83 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AC087045.1-201ENST00000605856 382 ntBASIC3.14□□□□□ -1.91
MBD4O95243 uc_338.14-201ENST00000613162 166 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AL359740.1-201ENST00000624340 592 ntBASIC3.14□□□□□ -1.91
MBD4O95243 AC092608.2-201ENST00000624427 218 ntBASIC3.14□□□□□ -1.91
MBD4O95243 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MBD4O95243 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MBD4O95243 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MBD4O95243 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD4O95243 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
MBD4O95243 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MBD4O95243 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.13□□□□□ -1.91
MBD4O95243 SNORD62.1-201ENST00000362541 86 ntBASIC3.13□□□□□ -1.91
MBD4O95243 MIR518D-201ENST00000385014 87 ntBASIC3.13□□□□□ -1.91
MBD4O95243 EEF1A1P40-201ENST00000412883 573 ntBASIC3.13□□□□□ -1.91
MBD4O95243 OR6C66P-201ENST00000414917 930 ntBASIC3.13□□□□□ -1.91
MBD4O95243 RPLP0P7-201ENST00000416050 667 ntBASIC3.13□□□□□ -1.91
MBD4O95243 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MBD4O95243 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms